Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smchd1Q6P5D8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.43■□□□□ 0.7
Smchd1Q6P5D8 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.43■□□□□ 0.7
Smchd1Q6P5D8 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Smchd1Q6P5D8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smchd1Q6P5D8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smchd1Q6P5D8 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
Smchd1Q6P5D8 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smchd1Q6P5D8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smchd1Q6P5D8 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smchd1Q6P5D8 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smchd1Q6P5D8 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smchd1Q6P5D8 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Smchd1Q6P5D8 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.42■□□□□ 0.7
Smchd1Q6P5D8 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smchd1Q6P5D8 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smchd1Q6P5D8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Smchd1Q6P5D8 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smchd1Q6P5D8 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smchd1Q6P5D8 Gm7638-201ENSMUST00000121348 967 ntBASIC19.42■□□□□ 0.7
Smchd1Q6P5D8 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.42■□□□□ 0.7
Smchd1Q6P5D8 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smchd1Q6P5D8 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smchd1Q6P5D8 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smchd1Q6P5D8 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smchd1Q6P5D8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Smchd1Q6P5D8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smchd1Q6P5D8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Smchd1Q6P5D8 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Smchd1Q6P5D8 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.41■□□□□ 0.7
Smchd1Q6P5D8 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smchd1Q6P5D8 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Smchd1Q6P5D8 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smchd1Q6P5D8 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smchd1Q6P5D8 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smchd1Q6P5D8 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Smchd1Q6P5D8 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.41■□□□□ 0.7
Smchd1Q6P5D8 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smchd1Q6P5D8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smchd1Q6P5D8 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smchd1Q6P5D8 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smchd1Q6P5D8 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smchd1Q6P5D8 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smchd1Q6P5D8 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smchd1Q6P5D8 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.4■□□□□ 0.7
Smchd1Q6P5D8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Smchd1Q6P5D8 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.4■□□□□ 0.7
Smchd1Q6P5D8 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smchd1Q6P5D8 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smchd1Q6P5D8 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Smchd1Q6P5D8 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smchd1Q6P5D8 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smchd1Q6P5D8 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.4■□□□□ 0.7
Smchd1Q6P5D8 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smchd1Q6P5D8 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Smchd1Q6P5D8 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smchd1Q6P5D8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Smchd1Q6P5D8 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Smchd1Q6P5D8 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Smchd1Q6P5D8 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smchd1Q6P5D8 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.39■□□□□ 0.69
Smchd1Q6P5D8 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Smchd1Q6P5D8 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smchd1Q6P5D8 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Smchd1Q6P5D8 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smchd1Q6P5D8 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smchd1Q6P5D8 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Smchd1Q6P5D8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smchd1Q6P5D8 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smchd1Q6P5D8 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.39■□□□□ 0.69
Smchd1Q6P5D8 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smchd1Q6P5D8 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smchd1Q6P5D8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smchd1Q6P5D8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smchd1Q6P5D8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smchd1Q6P5D8 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smchd1Q6P5D8 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smchd1Q6P5D8 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smchd1Q6P5D8 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.38■□□□□ 0.69
Smchd1Q6P5D8 Gm7370-201ENSMUST00000219471 767 ntBASIC19.38■□□□□ 0.69
Smchd1Q6P5D8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smchd1Q6P5D8 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smchd1Q6P5D8 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smchd1Q6P5D8 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smchd1Q6P5D8 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Smchd1Q6P5D8 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smchd1Q6P5D8 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Smchd1Q6P5D8 Gm37025-201ENSMUST00000195159 829 ntBASIC19.37■□□□□ 0.69
Smchd1Q6P5D8 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smchd1Q6P5D8 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smchd1Q6P5D8 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smchd1Q6P5D8 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Smchd1Q6P5D8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smchd1Q6P5D8 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smchd1Q6P5D8 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Smchd1Q6P5D8 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smchd1Q6P5D8 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smchd1Q6P5D8 Gm27463-201ENSMUST00000183569 57 ntBASIC19.37■□□□□ 0.69
Smchd1Q6P5D8 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC19.37■□□□□ 0.69
Smchd1Q6P5D8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms