Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Casc4Q6P2L7 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Casc4Q6P2L7 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Casc4Q6P2L7 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Casc4Q6P2L7 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Casc4Q6P2L7 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Casc4Q6P2L7 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.85■□□□□ 0.45
Casc4Q6P2L7 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Casc4Q6P2L7 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
Casc4Q6P2L7 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Casc4Q6P2L7 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Casc4Q6P2L7 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Casc4Q6P2L7 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Casc4Q6P2L7 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Casc4Q6P2L7 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Casc4Q6P2L7 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Casc4Q6P2L7 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Casc4Q6P2L7 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Casc4Q6P2L7 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Casc4Q6P2L7 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Casc4Q6P2L7 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Casc4Q6P2L7 Gm10138-203ENSMUST00000206952 366 ntBASIC17.84■□□□□ 0.45
Casc4Q6P2L7 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Casc4Q6P2L7 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Casc4Q6P2L7 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Casc4Q6P2L7 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Casc4Q6P2L7 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Casc4Q6P2L7 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Casc4Q6P2L7 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Casc4Q6P2L7 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.83■□□□□ 0.45
Casc4Q6P2L7 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Casc4Q6P2L7 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Casc4Q6P2L7 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Casc4Q6P2L7 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Casc4Q6P2L7 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Casc4Q6P2L7 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Casc4Q6P2L7 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Casc4Q6P2L7 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.83■□□□□ 0.44
Casc4Q6P2L7 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Casc4Q6P2L7 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Casc4Q6P2L7 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Casc4Q6P2L7 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
Casc4Q6P2L7 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.82■□□□□ 0.44
Casc4Q6P2L7 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Casc4Q6P2L7 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Casc4Q6P2L7 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Casc4Q6P2L7 Gm5643-201ENSMUST00000117081 966 ntBASIC17.82■□□□□ 0.44
Casc4Q6P2L7 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Casc4Q6P2L7 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Casc4Q6P2L7 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Casc4Q6P2L7 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Casc4Q6P2L7 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Casc4Q6P2L7 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Casc4Q6P2L7 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Casc4Q6P2L7 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Casc4Q6P2L7 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Casc4Q6P2L7 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Casc4Q6P2L7 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.82■□□□□ 0.44
Casc4Q6P2L7 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Casc4Q6P2L7 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.81■□□□□ 0.44
Casc4Q6P2L7 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Casc4Q6P2L7 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.81■□□□□ 0.44
Casc4Q6P2L7 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Casc4Q6P2L7 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.81■□□□□ 0.44
Casc4Q6P2L7 Mir6349-201ENSMUST00000184059 97 ntBASIC17.81■□□□□ 0.44
Casc4Q6P2L7 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Casc4Q6P2L7 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Casc4Q6P2L7 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.81■□□□□ 0.44
Casc4Q6P2L7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Casc4Q6P2L7 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Casc4Q6P2L7 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.81■□□□□ 0.44
Casc4Q6P2L7 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Casc4Q6P2L7 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Casc4Q6P2L7 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Casc4Q6P2L7 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Casc4Q6P2L7 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Casc4Q6P2L7 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Casc4Q6P2L7 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Casc4Q6P2L7 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.8■□□□□ 0.44
Casc4Q6P2L7 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Casc4Q6P2L7 Gm22240-201ENSMUST00000175225 82 ntBASIC17.8■□□□□ 0.44
Casc4Q6P2L7 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Casc4Q6P2L7 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Casc4Q6P2L7 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Casc4Q6P2L7 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Casc4Q6P2L7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Casc4Q6P2L7 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Casc4Q6P2L7 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Casc4Q6P2L7 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Casc4Q6P2L7 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Casc4Q6P2L7 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Casc4Q6P2L7 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Casc4Q6P2L7 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.79■□□□□ 0.44
Casc4Q6P2L7 Gm15375-201ENSMUST00000119510 849 ntBASIC17.79■□□□□ 0.44
Casc4Q6P2L7 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.79■□□□□ 0.44
Casc4Q6P2L7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.79■□□□□ 0.44
Casc4Q6P2L7 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.79■□□□□ 0.44
Casc4Q6P2L7 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.79■□□□□ 0.44
Casc4Q6P2L7 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Casc4Q6P2L7 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms