Protein–RNA interactions for Protein: Q6IFX3

Krt40, Keratin, type I cytoskeletal 40, mousemouse

Predictions only

Length 439 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt40Q6IFX3 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.82■□□□□ 0.92
Krt40Q6IFX3 Mir8112-201ENSMUST00000184382 131 ntBASIC20.82■□□□□ 0.92
Krt40Q6IFX3 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.82■□□□□ 0.92
Krt40Q6IFX3 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Krt40Q6IFX3 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Krt40Q6IFX3 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Krt40Q6IFX3 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Krt40Q6IFX3 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Krt40Q6IFX3 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Krt40Q6IFX3 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Krt40Q6IFX3 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.81■□□□□ 0.92
Krt40Q6IFX3 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.81■□□□□ 0.92
Krt40Q6IFX3 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Krt40Q6IFX3 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Krt40Q6IFX3 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Krt40Q6IFX3 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Krt40Q6IFX3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Krt40Q6IFX3 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Krt40Q6IFX3 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Krt40Q6IFX3 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Krt40Q6IFX3 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Krt40Q6IFX3 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Krt40Q6IFX3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Krt40Q6IFX3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Krt40Q6IFX3 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Krt40Q6IFX3 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Krt40Q6IFX3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Krt40Q6IFX3 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Krt40Q6IFX3 Gm18959-201ENSMUST00000208954 655 ntBASIC20.8■□□□□ 0.92
Krt40Q6IFX3 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Krt40Q6IFX3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Krt40Q6IFX3 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Krt40Q6IFX3 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Krt40Q6IFX3 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Krt40Q6IFX3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Krt40Q6IFX3 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Krt40Q6IFX3 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Krt40Q6IFX3 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Krt40Q6IFX3 Gm7791-201ENSMUST00000219066 539 ntBASIC20.79■□□□□ 0.92
Krt40Q6IFX3 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Krt40Q6IFX3 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Krt40Q6IFX3 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Krt40Q6IFX3 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Krt40Q6IFX3 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Krt40Q6IFX3 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Krt40Q6IFX3 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Krt40Q6IFX3 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Krt40Q6IFX3 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Krt40Q6IFX3 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Krt40Q6IFX3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Krt40Q6IFX3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Krt40Q6IFX3 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Krt40Q6IFX3 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Krt40Q6IFX3 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Krt40Q6IFX3 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.78■□□□□ 0.92
Krt40Q6IFX3 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Krt40Q6IFX3 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
Krt40Q6IFX3 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.78■□□□□ 0.92
Krt40Q6IFX3 Gm2274-201ENSMUST00000184539 609 ntBASIC20.78■□□□□ 0.92
Krt40Q6IFX3 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Krt40Q6IFX3 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Krt40Q6IFX3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Krt40Q6IFX3 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Krt40Q6IFX3 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.78■□□□□ 0.92
Krt40Q6IFX3 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Krt40Q6IFX3 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Krt40Q6IFX3 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Krt40Q6IFX3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Krt40Q6IFX3 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Krt40Q6IFX3 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Krt40Q6IFX3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Krt40Q6IFX3 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Krt40Q6IFX3 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.77■□□□□ 0.92
Krt40Q6IFX3 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Krt40Q6IFX3 Gm37025-201ENSMUST00000195159 829 ntBASIC20.77■□□□□ 0.92
Krt40Q6IFX3 Gm45058-201ENSMUST00000205810 766 ntBASIC20.77■□□□□ 0.92
Krt40Q6IFX3 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Krt40Q6IFX3 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Krt40Q6IFX3 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Krt40Q6IFX3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Krt40Q6IFX3 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Krt40Q6IFX3 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Krt40Q6IFX3 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Krt40Q6IFX3 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.76■□□□□ 0.91
Krt40Q6IFX3 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Krt40Q6IFX3 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Krt40Q6IFX3 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Krt40Q6IFX3 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Krt40Q6IFX3 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Krt40Q6IFX3 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Krt40Q6IFX3 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.76■□□□□ 0.91
Krt40Q6IFX3 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Krt40Q6IFX3 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.76■□□□□ 0.91
Krt40Q6IFX3 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Krt40Q6IFX3 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.76■□□□□ 0.91
Krt40Q6IFX3 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Krt40Q6IFX3 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Krt40Q6IFX3 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Krt40Q6IFX3 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Krt40Q6IFX3 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms