Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga7Q6DD96 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.1■□□□□ 0.33
Pcdhga7Q6DD96 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga7Q6DD96 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Pcdhga7Q6DD96 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga7Q6DD96 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga7Q6DD96 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga7Q6DD96 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga7Q6DD96 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga7Q6DD96 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhga7Q6DD96 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga7Q6DD96 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga7Q6DD96 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga7Q6DD96 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga7Q6DD96 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Pcdhga7Q6DD96 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga7Q6DD96 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga7Q6DD96 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.09■□□□□ 0.33
Pcdhga7Q6DD96 Gm8495-201ENSMUST00000188740 694 ntBASIC17.09■□□□□ 0.33
Pcdhga7Q6DD96 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga7Q6DD96 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga7Q6DD96 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga7Q6DD96 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga7Q6DD96 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga7Q6DD96 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga7Q6DD96 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga7Q6DD96 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga7Q6DD96 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga7Q6DD96 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga7Q6DD96 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhga7Q6DD96 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhga7Q6DD96 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhga7Q6DD96 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.08■□□□□ 0.33
Pcdhga7Q6DD96 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.08■□□□□ 0.33
Pcdhga7Q6DD96 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhga7Q6DD96 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhga7Q6DD96 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhga7Q6DD96 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga7Q6DD96 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga7Q6DD96 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Pcdhga7Q6DD96 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.08■□□□□ 0.32
Pcdhga7Q6DD96 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga7Q6DD96 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga7Q6DD96 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga7Q6DD96 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.32
Pcdhga7Q6DD96 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga7Q6DD96 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga7Q6DD96 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga7Q6DD96 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Pcdhga7Q6DD96 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga7Q6DD96 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Pcdhga7Q6DD96 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga7Q6DD96 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga7Q6DD96 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga7Q6DD96 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga7Q6DD96 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga7Q6DD96 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga7Q6DD96 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.07■□□□□ 0.32
Pcdhga7Q6DD96 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Pcdhga7Q6DD96 Gm38285-201ENSMUST00000192928 922 ntBASIC17.07■□□□□ 0.32
Pcdhga7Q6DD96 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.07■□□□□ 0.32
Pcdhga7Q6DD96 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.07■□□□□ 0.32
Pcdhga7Q6DD96 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga7Q6DD96 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Pcdhga7Q6DD96 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Pcdhga7Q6DD96 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga7Q6DD96 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga7Q6DD96 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga7Q6DD96 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Pcdhga7Q6DD96 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.07■□□□□ 0.32
Pcdhga7Q6DD96 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Pcdhga7Q6DD96 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga7Q6DD96 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga7Q6DD96 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga7Q6DD96 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga7Q6DD96 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Pcdhga7Q6DD96 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Pcdhga7Q6DD96 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga7Q6DD96 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga7Q6DD96 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga7Q6DD96 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga7Q6DD96 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.06■□□□□ 0.32
Pcdhga7Q6DD96 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga7Q6DD96 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga7Q6DD96 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga7Q6DD96 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Pcdhga7Q6DD96 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.06■□□□□ 0.32
Pcdhga7Q6DD96 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga7Q6DD96 Gm2399-201ENSMUST00000104944 225 ntBASIC17.06■□□□□ 0.32
Pcdhga7Q6DD96 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.06■□□□□ 0.32
Pcdhga7Q6DD96 Gm13148-201ENSMUST00000118892 745 ntBASIC17.06■□□□□ 0.32
Pcdhga7Q6DD96 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga7Q6DD96 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Pcdhga7Q6DD96 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga7Q6DD96 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga7Q6DD96 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga7Q6DD96 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga7Q6DD96 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga7Q6DD96 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.06■□□□□ 0.32
Pcdhga7Q6DD96 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms