Protein–RNA interactions for Protein: Q62247

Sox16, Protein SOX-16 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox16Q62247 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sox16Q62247 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sox16Q62247 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sox16Q62247 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC10.04□□□□□ -0.8
Sox16Q62247 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sox16Q62247 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sox16Q62247 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Sox16Q62247 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Sox16Q62247 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sox16Q62247 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sox16Q62247 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sox16Q62247 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sox16Q62247 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Sox16Q62247 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Sox16Q62247 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sox16Q62247 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC10.04□□□□□ -0.8
Sox16Q62247 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sox16Q62247 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sox16Q62247 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Sox16Q62247 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC10.04□□□□□ -0.8
Sox16Q62247 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sox16Q62247 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sox16Q62247 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sox16Q62247 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sox16Q62247 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sox16Q62247 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Sox16Q62247 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sox16Q62247 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sox16Q62247 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sox16Q62247 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sox16Q62247 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sox16Q62247 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Sox16Q62247 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC10.04□□□□□ -0.8
Sox16Q62247 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Sox16Q62247 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC10.03□□□□□ -0.8
Sox16Q62247 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sox16Q62247 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.03□□□□□ -0.8
Sox16Q62247 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sox16Q62247 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Sox16Q62247 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sox16Q62247 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sox16Q62247 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sox16Q62247 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sox16Q62247 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sox16Q62247 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC10.03□□□□□ -0.8
Sox16Q62247 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sox16Q62247 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sox16Q62247 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Sox16Q62247 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sox16Q62247 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sox16Q62247 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sox16Q62247 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sox16Q62247 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Sox16Q62247 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sox16Q62247 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sox16Q62247 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sox16Q62247 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Sox16Q62247 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sox16Q62247 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Sox16Q62247 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sox16Q62247 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Sox16Q62247 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC10.03□□□□□ -0.8
Sox16Q62247 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Sox16Q62247 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Sox16Q62247 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.8
Sox16Q62247 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Sox16Q62247 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Sox16Q62247 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Sox16Q62247 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Sox16Q62247 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Sox16Q62247 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC10.02□□□□□ -0.8
Sox16Q62247 Gm18688-201ENSMUST00000204695 1859 ntBASIC10.02□□□□□ -0.8
Sox16Q62247 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Sox16Q62247 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Sox16Q62247 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Sox16Q62247 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Sox16Q62247 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sox16Q62247 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sox16Q62247 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sox16Q62247 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Sox16Q62247 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Sox16Q62247 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sox16Q62247 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sox16Q62247 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC10.02□□□□□ -0.81
Sox16Q62247 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sox16Q62247 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sox16Q62247 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Sox16Q62247 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sox16Q62247 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Sox16Q62247 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC10.02□□□□□ -0.81
Sox16Q62247 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Sox16Q62247 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sox16Q62247 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sox16Q62247 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sox16Q62247 Gm45760-201ENSMUST00000212190 1782 ntBASIC10.01□□□□□ -0.81
Sox16Q62247 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Sox16Q62247 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Sox16Q62247 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Sox16Q62247 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC10.01□□□□□ -0.81
Sox16Q62247 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms