Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Six3Q62233 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.26■□□□□ 0.35
Six3Q62233 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Six3Q62233 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six3Q62233 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six3Q62233 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.25■□□□□ 0.35
Six3Q62233 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six3Q62233 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six3Q62233 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Six3Q62233 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six3Q62233 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six3Q62233 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six3Q62233 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Six3Q62233 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six3Q62233 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six3Q62233 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six3Q62233 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Six3Q62233 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.25■□□□□ 0.35
Six3Q62233 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Six3Q62233 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six3Q62233 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six3Q62233 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six3Q62233 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Six3Q62233 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six3Q62233 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.25■□□□□ 0.35
Six3Q62233 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Six3Q62233 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six3Q62233 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.24■□□□□ 0.35
Six3Q62233 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six3Q62233 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six3Q62233 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six3Q62233 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Six3Q62233 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six3Q62233 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six3Q62233 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six3Q62233 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Six3Q62233 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Six3Q62233 Rab3c-203ENSMUST00000224180 967 ntBASIC17.24■□□□□ 0.35
Six3Q62233 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six3Q62233 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six3Q62233 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six3Q62233 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
Six3Q62233 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.24■□□□□ 0.35
Six3Q62233 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six3Q62233 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six3Q62233 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six3Q62233 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six3Q62233 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Six3Q62233 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six3Q62233 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six3Q62233 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Six3Q62233 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six3Q62233 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.23■□□□□ 0.35
Six3Q62233 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.23■□□□□ 0.35
Six3Q62233 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six3Q62233 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six3Q62233 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six3Q62233 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.23■□□□□ 0.35
Six3Q62233 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Six3Q62233 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six3Q62233 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six3Q62233 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six3Q62233 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six3Q62233 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six3Q62233 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six3Q62233 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six3Q62233 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six3Q62233 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six3Q62233 Gm37179-201ENSMUST00000194862 823 ntBASIC17.22■□□□□ 0.35
Six3Q62233 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six3Q62233 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six3Q62233 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six3Q62233 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six3Q62233 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six3Q62233 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Six3Q62233 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Six3Q62233 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Six3Q62233 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six3Q62233 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Six3Q62233 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Six3Q62233 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.21■□□□□ 0.35
Six3Q62233 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six3Q62233 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.21■□□□□ 0.35
Six3Q62233 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six3Q62233 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.21■□□□□ 0.35
Six3Q62233 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six3Q62233 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six3Q62233 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six3Q62233 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Six3Q62233 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Six3Q62233 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.21■□□□□ 0.35
Six3Q62233 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.21■□□□□ 0.35
Six3Q62233 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Six3Q62233 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.21■□□□□ 0.35
Six3Q62233 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six3Q62233 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.21■□□□□ 0.35
Six3Q62233 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.21■□□□□ 0.35
Six3Q62233 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six3Q62233 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Six3Q62233 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms