Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Scn9aQ62205 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scn9aQ62205 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.87■□□□□ 0.93
Scn9aQ62205 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scn9aQ62205 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Scn9aQ62205 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Scn9aQ62205 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Scn9aQ62205 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Scn9aQ62205 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Scn9aQ62205 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Scn9aQ62205 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn9aQ62205 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Scn9aQ62205 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn9aQ62205 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn9aQ62205 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn9aQ62205 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn9aQ62205 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Scn9aQ62205 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
Scn9aQ62205 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC20.86■□□□□ 0.93
Scn9aQ62205 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC20.86■□□□□ 0.93
Scn9aQ62205 Gm27459-201ENSMUST00000184860 107 ntBASIC20.86■□□□□ 0.93
Scn9aQ62205 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC20.86■□□□□ 0.93
Scn9aQ62205 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn9aQ62205 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn9aQ62205 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn9aQ62205 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn9aQ62205 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Scn9aQ62205 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.85■□□□□ 0.93
Scn9aQ62205 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scn9aQ62205 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scn9aQ62205 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
Scn9aQ62205 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Scn9aQ62205 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Scn9aQ62205 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Scn9aQ62205 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Scn9aQ62205 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.85■□□□□ 0.93
Scn9aQ62205 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scn9aQ62205 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.85■□□□□ 0.93
Scn9aQ62205 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Scn9aQ62205 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scn9aQ62205 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Scn9aQ62205 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scn9aQ62205 Actl10-202ENSMUST00000226583 1501 ntBASIC20.84■□□□□ 0.93
Scn9aQ62205 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Scn9aQ62205 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Scn9aQ62205 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scn9aQ62205 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Scn9aQ62205 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC20.84■□□□□ 0.93
Scn9aQ62205 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scn9aQ62205 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scn9aQ62205 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Scn9aQ62205 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scn9aQ62205 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scn9aQ62205 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Scn9aQ62205 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scn9aQ62205 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Scn9aQ62205 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Scn9aQ62205 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC20.83■□□□□ 0.93
Scn9aQ62205 Gm26039-201ENSMUST00000158152 144 ntBASIC20.83■□□□□ 0.93
Scn9aQ62205 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Scn9aQ62205 Gm28659-201ENSMUST00000188013 759 ntBASIC20.83■□□□□ 0.93
Scn9aQ62205 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.83■□□□□ 0.92
Scn9aQ62205 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Scn9aQ62205 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
Scn9aQ62205 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.83■□□□□ 0.92
Scn9aQ62205 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Scn9aQ62205 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
Scn9aQ62205 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Scn9aQ62205 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Scn9aQ62205 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Scn9aQ62205 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Scn9aQ62205 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scn9aQ62205 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scn9aQ62205 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC20.82■□□□□ 0.92
Scn9aQ62205 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scn9aQ62205 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scn9aQ62205 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Scn9aQ62205 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scn9aQ62205 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scn9aQ62205 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scn9aQ62205 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn9aQ62205 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn9aQ62205 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Scn9aQ62205 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Scn9aQ62205 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.81■□□□□ 0.92
Scn9aQ62205 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.81■□□□□ 0.92
Scn9aQ62205 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn9aQ62205 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.81■□□□□ 0.92
Scn9aQ62205 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn9aQ62205 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Scn9aQ62205 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn9aQ62205 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn9aQ62205 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn9aQ62205 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn9aQ62205 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn9aQ62205 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Scn9aQ62205 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn9aQ62205 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn9aQ62205 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.8■□□□□ 0.92
Scn9aQ62205 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms