Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcd1Q61466 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcd1Q61466 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.41■□□□□ 0.54
Smarcd1Q61466 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcd1Q61466 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcd1Q61466 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.41■□□□□ 0.54
Smarcd1Q61466 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcd1Q61466 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.41■□□□□ 0.54
Smarcd1Q61466 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.41■□□□□ 0.54
Smarcd1Q61466 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.41■□□□□ 0.54
Smarcd1Q61466 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Smarcd1Q61466 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcd1Q61466 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcd1Q61466 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcd1Q61466 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcd1Q61466 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Smarcd1Q61466 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcd1Q61466 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Smarcd1Q61466 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcd1Q61466 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Smarcd1Q61466 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.4■□□□□ 0.54
Smarcd1Q61466 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcd1Q61466 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.4■□□□□ 0.54
Smarcd1Q61466 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcd1Q61466 Gm3375-201ENSMUST00000203929 796 ntBASIC18.4■□□□□ 0.54
Smarcd1Q61466 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.4■□□□□ 0.54
Smarcd1Q61466 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcd1Q61466 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcd1Q61466 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Smarcd1Q61466 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcd1Q61466 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Smarcd1Q61466 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Smarcd1Q61466 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcd1Q61466 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcd1Q61466 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.39■□□□□ 0.53
Smarcd1Q61466 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcd1Q61466 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.39■□□□□ 0.53
Smarcd1Q61466 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.39■□□□□ 0.53
Smarcd1Q61466 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcd1Q61466 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.39■□□□□ 0.53
Smarcd1Q61466 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.39■□□□□ 0.53
Smarcd1Q61466 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcd1Q61466 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcd1Q61466 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcd1Q61466 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcd1Q61466 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcd1Q61466 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcd1Q61466 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcd1Q61466 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcd1Q61466 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcd1Q61466 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Smarcd1Q61466 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcd1Q61466 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcd1Q61466 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.38■□□□□ 0.53
Smarcd1Q61466 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcd1Q61466 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Smarcd1Q61466 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Smarcd1Q61466 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcd1Q61466 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcd1Q61466 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcd1Q61466 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcd1Q61466 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcd1Q61466 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcd1Q61466 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcd1Q61466 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcd1Q61466 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.37■□□□□ 0.53
Smarcd1Q61466 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcd1Q61466 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcd1Q61466 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcd1Q61466 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcd1Q61466 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcd1Q61466 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcd1Q61466 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcd1Q61466 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcd1Q61466 Gm12085-201ENSMUST00000119263 940 ntBASIC18.36■□□□□ 0.53
Smarcd1Q61466 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Smarcd1Q61466 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcd1Q61466 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Smarcd1Q61466 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcd1Q61466 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcd1Q61466 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Smarcd1Q61466 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcd1Q61466 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcd1Q61466 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcd1Q61466 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcd1Q61466 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcd1Q61466 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Smarcd1Q61466 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcd1Q61466 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcd1Q61466 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcd1Q61466 Gm15565-201ENSMUST00000118890 427 ntBASIC18.35■□□□□ 0.53
Smarcd1Q61466 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.35■□□□□ 0.53
Smarcd1Q61466 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcd1Q61466 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcd1Q61466 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.35■□□□□ 0.53
Smarcd1Q61466 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.35■□□□□ 0.53
Smarcd1Q61466 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.35■□□□□ 0.53
Smarcd1Q61466 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Smarcd1Q61466 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
Smarcd1Q61466 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms