Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ift88Q61371 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ift88Q61371 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ift88Q61371 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ift88Q61371 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ift88Q61371 AV356131-201ENSMUST00000206201 750 ntBASIC19.55■□□□□ 0.72
Ift88Q61371 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
Ift88Q61371 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.55■□□□□ 0.72
Ift88Q61371 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ift88Q61371 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ift88Q61371 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ift88Q61371 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ift88Q61371 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ift88Q61371 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ift88Q61371 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ift88Q61371 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ift88Q61371 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ift88Q61371 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ift88Q61371 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ift88Q61371 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ift88Q61371 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ift88Q61371 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.54■□□□□ 0.72
Ift88Q61371 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Ift88Q61371 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.54■□□□□ 0.72
Ift88Q61371 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ift88Q61371 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Ift88Q61371 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Ift88Q61371 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ift88Q61371 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ift88Q61371 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ift88Q61371 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ift88Q61371 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
Ift88Q61371 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ift88Q61371 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ift88Q61371 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ift88Q61371 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ift88Q61371 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ift88Q61371 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ift88Q61371 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Ift88Q61371 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ift88Q61371 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Ift88Q61371 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ift88Q61371 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.53■□□□□ 0.72
Ift88Q61371 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ift88Q61371 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.53■□□□□ 0.72
Ift88Q61371 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.53■□□□□ 0.72
Ift88Q61371 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ift88Q61371 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Ift88Q61371 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ift88Q61371 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ift88Q61371 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ift88Q61371 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Ift88Q61371 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ift88Q61371 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ift88Q61371 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ift88Q61371 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ift88Q61371 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ift88Q61371 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ift88Q61371 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
Ift88Q61371 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.52■□□□□ 0.72
Ift88Q61371 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ift88Q61371 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ift88Q61371 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ift88Q61371 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ift88Q61371 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ift88Q61371 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ift88Q61371 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
Ift88Q61371 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Ift88Q61371 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ift88Q61371 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.52■□□□□ 0.72
Ift88Q61371 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.52■□□□□ 0.72
Ift88Q61371 Gm6365-201ENSMUST00000054711 744 ntBASIC19.52■□□□□ 0.72
Ift88Q61371 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ift88Q61371 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Ift88Q61371 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ift88Q61371 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.51■□□□□ 0.71
Ift88Q61371 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Ift88Q61371 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ift88Q61371 Gm5874-201ENSMUST00000096101 508 ntBASIC19.51■□□□□ 0.71
Ift88Q61371 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ift88Q61371 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ift88Q61371 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ift88Q61371 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ift88Q61371 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ift88Q61371 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ift88Q61371 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ift88Q61371 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ift88Q61371 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ift88Q61371 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Ift88Q61371 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Ift88Q61371 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ift88Q61371 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ift88Q61371 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ift88Q61371 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.5■□□□□ 0.71
Ift88Q61371 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ift88Q61371 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.5■□□□□ 0.71
Ift88Q61371 Gm7291-201ENSMUST00000199147 382 ntBASIC19.5■□□□□ 0.71
Ift88Q61371 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.5■□□□□ 0.71
Ift88Q61371 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ift88Q61371 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms