Protein–RNA interactions for Protein: Q61290

Cacna1e, Voltage-dependent R-type calcium channel subunit alpha-1E, mousemouse

Predictions only

Length 2,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1eQ61290 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cacna1eQ61290 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cacna1eQ61290 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cacna1eQ61290 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.38■□□□□ 0.37
Cacna1eQ61290 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.38■□□□□ 0.37
Cacna1eQ61290 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cacna1eQ61290 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.38■□□□□ 0.37
Cacna1eQ61290 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cacna1eQ61290 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cacna1eQ61290 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Cacna1eQ61290 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cacna1eQ61290 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cacna1eQ61290 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.38■□□□□ 0.37
Cacna1eQ61290 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cacna1eQ61290 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cacna1eQ61290 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Cacna1eQ61290 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.37■□□□□ 0.37
Cacna1eQ61290 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.37■□□□□ 0.37
Cacna1eQ61290 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cacna1eQ61290 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cacna1eQ61290 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cacna1eQ61290 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cacna1eQ61290 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Cacna1eQ61290 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cacna1eQ61290 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cacna1eQ61290 Gm27704-201ENSMUST00000185094 107 ntBASIC17.37■□□□□ 0.37
Cacna1eQ61290 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cacna1eQ61290 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cacna1eQ61290 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cacna1eQ61290 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cacna1eQ61290 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Cacna1eQ61290 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cacna1eQ61290 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Cacna1eQ61290 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.36■□□□□ 0.37
Cacna1eQ61290 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cacna1eQ61290 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cacna1eQ61290 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Cacna1eQ61290 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cacna1eQ61290 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cacna1eQ61290 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cacna1eQ61290 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Cacna1eQ61290 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cacna1eQ61290 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cacna1eQ61290 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cacna1eQ61290 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cacna1eQ61290 Gm21559-201ENSMUST00000220638 855 ntBASIC17.36■□□□□ 0.37
Cacna1eQ61290 Gm8587-201ENSMUST00000076538 843 ntBASIC17.36■□□□□ 0.37
Cacna1eQ61290 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cacna1eQ61290 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cacna1eQ61290 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cacna1eQ61290 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cacna1eQ61290 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.35■□□□□ 0.37
Cacna1eQ61290 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cacna1eQ61290 Gm29518-201ENSMUST00000190858 372 ntBASIC17.35■□□□□ 0.37
Cacna1eQ61290 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cacna1eQ61290 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cacna1eQ61290 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cacna1eQ61290 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cacna1eQ61290 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.35■□□□□ 0.37
Cacna1eQ61290 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.35■□□□□ 0.37
Cacna1eQ61290 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cacna1eQ61290 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cacna1eQ61290 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1eQ61290 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1eQ61290 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
Cacna1eQ61290 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1eQ61290 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.34■□□□□ 0.37
Cacna1eQ61290 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.34■□□□□ 0.37
Cacna1eQ61290 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.34■□□□□ 0.37
Cacna1eQ61290 Idnk-204ENSMUST00000226010 1898 ntBASIC17.34■□□□□ 0.37
Cacna1eQ61290 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1eQ61290 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1eQ61290 Gm10566-201ENSMUST00000086739 996 ntBASIC17.34■□□□□ 0.37
Cacna1eQ61290 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1eQ61290 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.34■□□□□ 0.37
Cacna1eQ61290 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1eQ61290 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cacna1eQ61290 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1eQ61290 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cacna1eQ61290 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cacna1eQ61290 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Cacna1eQ61290 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.33■□□□□ 0.37
Cacna1eQ61290 Gm17807-201ENSMUST00000186869 298 ntBASIC17.33■□□□□ 0.37
Cacna1eQ61290 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cacna1eQ61290 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cacna1eQ61290 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cacna1eQ61290 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cacna1eQ61290 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cacna1eQ61290 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cacna1eQ61290 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.33■□□□□ 0.36
Cacna1eQ61290 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Cacna1eQ61290 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cacna1eQ61290 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cacna1eQ61290 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cacna1eQ61290 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cacna1eQ61290 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cacna1eQ61290 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cacna1eQ61290 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cacna1eQ61290 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.33■□□□□ 0.36
Cacna1eQ61290 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms