Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sdf4Q61112 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sdf4Q61112 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Sdf4Q61112 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sdf4Q61112 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sdf4Q61112 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Sdf4Q61112 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sdf4Q61112 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.9■□□□□ 0.46
Sdf4Q61112 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sdf4Q61112 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sdf4Q61112 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sdf4Q61112 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Sdf4Q61112 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sdf4Q61112 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sdf4Q61112 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sdf4Q61112 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.9■□□□□ 0.46
Sdf4Q61112 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sdf4Q61112 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
Sdf4Q61112 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.9■□□□□ 0.46
Sdf4Q61112 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Sdf4Q61112 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sdf4Q61112 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sdf4Q61112 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sdf4Q61112 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sdf4Q61112 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sdf4Q61112 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Sdf4Q61112 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Sdf4Q61112 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Sdf4Q61112 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Sdf4Q61112 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Sdf4Q61112 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sdf4Q61112 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Sdf4Q61112 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sdf4Q61112 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sdf4Q61112 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sdf4Q61112 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sdf4Q61112 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sdf4Q61112 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sdf4Q61112 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Sdf4Q61112 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sdf4Q61112 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sdf4Q61112 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sdf4Q61112 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sdf4Q61112 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sdf4Q61112 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sdf4Q61112 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sdf4Q61112 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sdf4Q61112 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Sdf4Q61112 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sdf4Q61112 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sdf4Q61112 Gm11643-201ENSMUST00000119578 864 ntBASIC17.88■□□□□ 0.45
Sdf4Q61112 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Sdf4Q61112 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Sdf4Q61112 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sdf4Q61112 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Sdf4Q61112 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Sdf4Q61112 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sdf4Q61112 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sdf4Q61112 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sdf4Q61112 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sdf4Q61112 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.88■□□□□ 0.45
Sdf4Q61112 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sdf4Q61112 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sdf4Q61112 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sdf4Q61112 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.87■□□□□ 0.45
Sdf4Q61112 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Sdf4Q61112 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.87■□□□□ 0.45
Sdf4Q61112 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.87■□□□□ 0.45
Sdf4Q61112 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Sdf4Q61112 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.87■□□□□ 0.45
Sdf4Q61112 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.87■□□□□ 0.45
Sdf4Q61112 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sdf4Q61112 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sdf4Q61112 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sdf4Q61112 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sdf4Q61112 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sdf4Q61112 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sdf4Q61112 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sdf4Q61112 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sdf4Q61112 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sdf4Q61112 Idnk-204ENSMUST00000226010 1898 ntBASIC17.86■□□□□ 0.45
Sdf4Q61112 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sdf4Q61112 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.86■□□□□ 0.45
Sdf4Q61112 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sdf4Q61112 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sdf4Q61112 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Sdf4Q61112 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Sdf4Q61112 Gm10653-202ENSMUST00000139570 835 ntBASIC17.86■□□□□ 0.45
Sdf4Q61112 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.86■□□□□ 0.45
Sdf4Q61112 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.86■□□□□ 0.45
Sdf4Q61112 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.86■□□□□ 0.45
Sdf4Q61112 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sdf4Q61112 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sdf4Q61112 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Sdf4Q61112 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.86■□□□□ 0.45
Sdf4Q61112 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Sdf4Q61112 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sdf4Q61112 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sdf4Q61112 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sdf4Q61112 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms