Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ripk1Q60855 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ripk1Q60855 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Ripk1Q60855 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ripk1Q60855 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Ripk1Q60855 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Ripk1Q60855 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Ripk1Q60855 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ripk1Q60855 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ripk1Q60855 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ripk1Q60855 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.64■□□□□ 0.25
Ripk1Q60855 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ripk1Q60855 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ripk1Q60855 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Ripk1Q60855 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.64■□□□□ 0.25
Ripk1Q60855 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ripk1Q60855 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ripk1Q60855 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ripk1Q60855 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ripk1Q60855 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ripk1Q60855 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ripk1Q60855 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ripk1Q60855 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ripk1Q60855 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ripk1Q60855 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ripk1Q60855 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ripk1Q60855 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Ripk1Q60855 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Ripk1Q60855 Gm2559-201ENSMUST00000201323 363 ntBASIC16.63■□□□□ 0.25
Ripk1Q60855 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ripk1Q60855 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ripk1Q60855 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ripk1Q60855 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ripk1Q60855 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ripk1Q60855 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ripk1Q60855 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ripk1Q60855 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ripk1Q60855 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ripk1Q60855 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Ripk1Q60855 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ripk1Q60855 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ripk1Q60855 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ripk1Q60855 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Ripk1Q60855 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ripk1Q60855 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ripk1Q60855 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ripk1Q60855 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ripk1Q60855 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ripk1Q60855 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ripk1Q60855 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ripk1Q60855 Gm11927-201ENSMUST00000118472 759 ntBASIC16.62■□□□□ 0.25
Ripk1Q60855 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.62■□□□□ 0.25
Ripk1Q60855 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ripk1Q60855 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.62■□□□□ 0.25
Ripk1Q60855 Gm4968-201ENSMUST00000071458 858 ntBASIC16.62■□□□□ 0.25
Ripk1Q60855 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ripk1Q60855 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ripk1Q60855 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ripk1Q60855 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ripk1Q60855 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ripk1Q60855 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ripk1Q60855 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ripk1Q60855 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ripk1Q60855 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ripk1Q60855 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ripk1Q60855 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Ripk1Q60855 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.61■□□□□ 0.25
Ripk1Q60855 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.61■□□□□ 0.25
Ripk1Q60855 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.61■□□□□ 0.25
Ripk1Q60855 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ripk1Q60855 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ripk1Q60855 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ripk1Q60855 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
Ripk1Q60855 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.6■□□□□ 0.25
Ripk1Q60855 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ripk1Q60855 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ripk1Q60855 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ripk1Q60855 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ripk1Q60855 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.6■□□□□ 0.25
Ripk1Q60855 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.6■□□□□ 0.25
Ripk1Q60855 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.6■□□□□ 0.25
Ripk1Q60855 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.6■□□□□ 0.25
Ripk1Q60855 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.6■□□□□ 0.25
Ripk1Q60855 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ripk1Q60855 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ripk1Q60855 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ripk1Q60855 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ripk1Q60855 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ripk1Q60855 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ripk1Q60855 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ripk1Q60855 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ripk1Q60855 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Ripk1Q60855 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ripk1Q60855 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ripk1Q60855 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.59■□□□□ 0.25
Ripk1Q60855 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ripk1Q60855 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ripk1Q60855 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ripk1Q60855 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ripk1Q60855 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms