Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1h4Q60641 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
Nr1h4Q60641 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nr1h4Q60641 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nr1h4Q60641 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Nr1h4Q60641 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.83■□□□□ 0.28
Nr1h4Q60641 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.83■□□□□ 0.28
Nr1h4Q60641 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.83■□□□□ 0.28
Nr1h4Q60641 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nr1h4Q60641 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.83■□□□□ 0.28
Nr1h4Q60641 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.83■□□□□ 0.28
Nr1h4Q60641 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nr1h4Q60641 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nr1h4Q60641 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.83■□□□□ 0.28
Nr1h4Q60641 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nr1h4Q60641 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nr1h4Q60641 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nr1h4Q60641 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nr1h4Q60641 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nr1h4Q60641 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1h4Q60641 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Nr1h4Q60641 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1h4Q60641 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.82■□□□□ 0.28
Nr1h4Q60641 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1h4Q60641 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1h4Q60641 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1h4Q60641 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1h4Q60641 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1h4Q60641 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1h4Q60641 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.82■□□□□ 0.28
Nr1h4Q60641 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1h4Q60641 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1h4Q60641 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1h4Q60641 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1h4Q60641 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1h4Q60641 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1h4Q60641 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1h4Q60641 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1h4Q60641 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Nr1h4Q60641 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1h4Q60641 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1h4Q60641 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1h4Q60641 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1h4Q60641 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1h4Q60641 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.81■□□□□ 0.28
Nr1h4Q60641 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1h4Q60641 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.81■□□□□ 0.28
Nr1h4Q60641 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Nr1h4Q60641 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1h4Q60641 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.81■□□□□ 0.28
Nr1h4Q60641 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1h4Q60641 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1h4Q60641 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1h4Q60641 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1h4Q60641 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1h4Q60641 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1h4Q60641 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Nr1h4Q60641 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Nr1h4Q60641 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Nr1h4Q60641 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.8■□□□□ 0.28
Nr1h4Q60641 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr1h4Q60641 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Nr1h4Q60641 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nr1h4Q60641 Gm42778-201ENSMUST00000199644 553 ntBASIC16.8■□□□□ 0.28
Nr1h4Q60641 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Nr1h4Q60641 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr1h4Q60641 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.8■□□□□ 0.28
Nr1h4Q60641 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.8■□□□□ 0.28
Nr1h4Q60641 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr1h4Q60641 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.8■□□□□ 0.28
Nr1h4Q60641 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.8■□□□□ 0.28
Nr1h4Q60641 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr1h4Q60641 Idnk-204ENSMUST00000226010 1898 ntBASIC16.8■□□□□ 0.28
Nr1h4Q60641 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr1h4Q60641 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr1h4Q60641 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr1h4Q60641 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1h4Q60641 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1h4Q60641 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Nr1h4Q60641 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1h4Q60641 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
Nr1h4Q60641 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1h4Q60641 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1h4Q60641 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1h4Q60641 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.79■□□□□ 0.28
Nr1h4Q60641 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1h4Q60641 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1h4Q60641 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1h4Q60641 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Nr1h4Q60641 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1h4Q60641 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1h4Q60641 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.78■□□□□ 0.28
Nr1h4Q60641 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1h4Q60641 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1h4Q60641 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1h4Q60641 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1h4Q60641 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1h4Q60641 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1h4Q60641 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1h4Q60641 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms