Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Xrcc1Q60596 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Xrcc1Q60596 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Xrcc1Q60596 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Xrcc1Q60596 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Xrcc1Q60596 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Xrcc1Q60596 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Xrcc1Q60596 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Xrcc1Q60596 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Xrcc1Q60596 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Xrcc1Q60596 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Xrcc1Q60596 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Xrcc1Q60596 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.85■□□□□ 0.29
Xrcc1Q60596 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Xrcc1Q60596 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Xrcc1Q60596 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.85■□□□□ 0.29
Xrcc1Q60596 Mir1199-201ENSMUST00000117015 119 ntBASIC16.85■□□□□ 0.29
Xrcc1Q60596 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Xrcc1Q60596 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Xrcc1Q60596 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Xrcc1Q60596 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Xrcc1Q60596 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Xrcc1Q60596 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Xrcc1Q60596 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Xrcc1Q60596 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Xrcc1Q60596 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Xrcc1Q60596 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Xrcc1Q60596 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Xrcc1Q60596 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Xrcc1Q60596 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Xrcc1Q60596 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Xrcc1Q60596 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Xrcc1Q60596 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.84■□□□□ 0.29
Xrcc1Q60596 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Xrcc1Q60596 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Xrcc1Q60596 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Xrcc1Q60596 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Xrcc1Q60596 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Xrcc1Q60596 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Xrcc1Q60596 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Xrcc1Q60596 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Xrcc1Q60596 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.84■□□□□ 0.29
Xrcc1Q60596 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.84■□□□□ 0.29
Xrcc1Q60596 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Xrcc1Q60596 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Xrcc1Q60596 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Xrcc1Q60596 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Xrcc1Q60596 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Xrcc1Q60596 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Xrcc1Q60596 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Xrcc1Q60596 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Xrcc1Q60596 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Xrcc1Q60596 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Xrcc1Q60596 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Xrcc1Q60596 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Xrcc1Q60596 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Xrcc1Q60596 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Xrcc1Q60596 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Xrcc1Q60596 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Xrcc1Q60596 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Xrcc1Q60596 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Xrcc1Q60596 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Xrcc1Q60596 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Xrcc1Q60596 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Xrcc1Q60596 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Xrcc1Q60596 Gm10418-201ENSMUST00000100943 576 ntBASIC16.83■□□□□ 0.28
Xrcc1Q60596 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.83■□□□□ 0.28
Xrcc1Q60596 Gm12382-201ENSMUST00000122005 922 ntBASIC16.83■□□□□ 0.28
Xrcc1Q60596 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Xrcc1Q60596 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Xrcc1Q60596 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.83■□□□□ 0.28
Xrcc1Q60596 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Xrcc1Q60596 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.83■□□□□ 0.28
Xrcc1Q60596 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Xrcc1Q60596 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Xrcc1Q60596 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Xrcc1Q60596 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Xrcc1Q60596 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Xrcc1Q60596 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Xrcc1Q60596 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Xrcc1Q60596 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Xrcc1Q60596 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Xrcc1Q60596 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Xrcc1Q60596 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Xrcc1Q60596 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Xrcc1Q60596 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Xrcc1Q60596 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Xrcc1Q60596 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Xrcc1Q60596 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.82■□□□□ 0.28
Xrcc1Q60596 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.82■□□□□ 0.28
Xrcc1Q60596 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Xrcc1Q60596 Gm6576-201ENSMUST00000169678 883 ntBASIC16.82■□□□□ 0.28
Xrcc1Q60596 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Xrcc1Q60596 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.82■□□□□ 0.28
Xrcc1Q60596 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Xrcc1Q60596 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Xrcc1Q60596 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Xrcc1Q60596 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Xrcc1Q60596 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Xrcc1Q60596 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms