Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ubr3Q5U430 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ubr3Q5U430 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ubr3Q5U430 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC21.52■■□□□ 1.04
Ubr3Q5U430 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ubr3Q5U430 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.52■■□□□ 1.03
Ubr3Q5U430 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
Ubr3Q5U430 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Ubr3Q5U430 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC21.52■■□□□ 1.03
Ubr3Q5U430 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Ubr3Q5U430 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
Ubr3Q5U430 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Ubr3Q5U430 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ubr3Q5U430 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Ubr3Q5U430 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ubr3Q5U430 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ubr3Q5U430 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ubr3Q5U430 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.51■■□□□ 1.03
Ubr3Q5U430 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
Ubr3Q5U430 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC21.51■■□□□ 1.03
Ubr3Q5U430 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC21.51■■□□□ 1.03
Ubr3Q5U430 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ubr3Q5U430 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ubr3Q5U430 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC21.51■■□□□ 1.03
Ubr3Q5U430 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ubr3Q5U430 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ubr3Q5U430 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ubr3Q5U430 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC21.5■■□□□ 1.03
Ubr3Q5U430 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC21.5■■□□□ 1.03
Ubr3Q5U430 Ighv6-1-201ENSMUST00000193612 343 ntBASIC21.5■■□□□ 1.03
Ubr3Q5U430 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC21.5■■□□□ 1.03
Ubr3Q5U430 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Ubr3Q5U430 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Ubr3Q5U430 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ubr3Q5U430 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Ubr3Q5U430 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Ubr3Q5U430 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ubr3Q5U430 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ubr3Q5U430 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ubr3Q5U430 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC21.49■■□□□ 1.03
Ubr3Q5U430 Gm5864-201ENSMUST00000202263 970 ntBASIC21.49■■□□□ 1.03
Ubr3Q5U430 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC21.49■■□□□ 1.03
Ubr3Q5U430 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ubr3Q5U430 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ubr3Q5U430 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.49■■□□□ 1.03
Ubr3Q5U430 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Ubr3Q5U430 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC21.49■■□□□ 1.03
Ubr3Q5U430 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC21.49■■□□□ 1.03
Ubr3Q5U430 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ubr3Q5U430 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
Ubr3Q5U430 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC21.49■■□□□ 1.03
Ubr3Q5U430 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Ubr3Q5U430 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC21.48■■□□□ 1.03
Ubr3Q5U430 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ubr3Q5U430 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ubr3Q5U430 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Ubr3Q5U430 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC21.48■■□□□ 1.03
Ubr3Q5U430 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC21.48■■□□□ 1.03
Ubr3Q5U430 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Ubr3Q5U430 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ubr3Q5U430 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ubr3Q5U430 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ubr3Q5U430 Gm43347-201ENSMUST00000200226 580 ntBASIC21.47■■□□□ 1.03
Ubr3Q5U430 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ubr3Q5U430 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ubr3Q5U430 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ubr3Q5U430 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ubr3Q5U430 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ubr3Q5U430 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ubr3Q5U430 Gm18733-201ENSMUST00000173950 856 ntBASIC21.47■■□□□ 1.03
Ubr3Q5U430 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ubr3Q5U430 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ubr3Q5U430 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ubr3Q5U430 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ubr3Q5U430 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ubr3Q5U430 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ubr3Q5U430 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ubr3Q5U430 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ubr3Q5U430 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC21.46■■□□□ 1.03
Ubr3Q5U430 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ubr3Q5U430 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ubr3Q5U430 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC21.46■■□□□ 1.03
Ubr3Q5U430 Gm27525-201ENSMUST00000184465 107 ntBASIC21.46■■□□□ 1.03
Ubr3Q5U430 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Ubr3Q5U430 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ubr3Q5U430 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ubr3Q5U430 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.03
Ubr3Q5U430 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.03
Ubr3Q5U430 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC21.45■■□□□ 1.03
Ubr3Q5U430 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Ubr3Q5U430 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC21.45■■□□□ 1.02
Ubr3Q5U430 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC21.45■■□□□ 1.02
Ubr3Q5U430 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC21.45■■□□□ 1.02
Ubr3Q5U430 AC159301.1-201ENSMUST00000225130 1182 ntBASIC21.45■■□□□ 1.02
Ubr3Q5U430 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ubr3Q5U430 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Ubr3Q5U430 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ubr3Q5U430 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ubr3Q5U430 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ubr3Q5U430 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms