Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Shroom1Q5SX79 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shroom1Q5SX79 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.77■□□□□ 0.6
Shroom1Q5SX79 Gm11539-201ENSMUST00000119837 557 ntBASIC18.77■□□□□ 0.6
Shroom1Q5SX79 Gm13436-201ENSMUST00000120418 567 ntBASIC18.77■□□□□ 0.6
Shroom1Q5SX79 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Shroom1Q5SX79 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.77■□□□□ 0.6
Shroom1Q5SX79 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Shroom1Q5SX79 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shroom1Q5SX79 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shroom1Q5SX79 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.59
Shroom1Q5SX79 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Shroom1Q5SX79 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Shroom1Q5SX79 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Shroom1Q5SX79 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Shroom1Q5SX79 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Shroom1Q5SX79 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Shroom1Q5SX79 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shroom1Q5SX79 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Shroom1Q5SX79 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Shroom1Q5SX79 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.76■□□□□ 0.59
Shroom1Q5SX79 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Shroom1Q5SX79 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Shroom1Q5SX79 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shroom1Q5SX79 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shroom1Q5SX79 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Shroom1Q5SX79 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shroom1Q5SX79 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.76■□□□□ 0.59
Shroom1Q5SX79 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Shroom1Q5SX79 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shroom1Q5SX79 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shroom1Q5SX79 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Shroom1Q5SX79 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shroom1Q5SX79 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.76■□□□□ 0.59
Shroom1Q5SX79 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Shroom1Q5SX79 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shroom1Q5SX79 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shroom1Q5SX79 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shroom1Q5SX79 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shroom1Q5SX79 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shroom1Q5SX79 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shroom1Q5SX79 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.75■□□□□ 0.59
Shroom1Q5SX79 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.75■□□□□ 0.59
Shroom1Q5SX79 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Shroom1Q5SX79 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Shroom1Q5SX79 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.75■□□□□ 0.59
Shroom1Q5SX79 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shroom1Q5SX79 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shroom1Q5SX79 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shroom1Q5SX79 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shroom1Q5SX79 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shroom1Q5SX79 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Shroom1Q5SX79 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Shroom1Q5SX79 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shroom1Q5SX79 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shroom1Q5SX79 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Shroom1Q5SX79 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.74■□□□□ 0.59
Shroom1Q5SX79 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shroom1Q5SX79 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shroom1Q5SX79 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.74■□□□□ 0.59
Shroom1Q5SX79 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shroom1Q5SX79 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Shroom1Q5SX79 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shroom1Q5SX79 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Shroom1Q5SX79 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shroom1Q5SX79 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shroom1Q5SX79 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shroom1Q5SX79 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shroom1Q5SX79 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Shroom1Q5SX79 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.73■□□□□ 0.59
Shroom1Q5SX79 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.73■□□□□ 0.59
Shroom1Q5SX79 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shroom1Q5SX79 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shroom1Q5SX79 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shroom1Q5SX79 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shroom1Q5SX79 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shroom1Q5SX79 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shroom1Q5SX79 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Shroom1Q5SX79 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.72■□□□□ 0.59
Shroom1Q5SX79 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Shroom1Q5SX79 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Shroom1Q5SX79 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Shroom1Q5SX79 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shroom1Q5SX79 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.72■□□□□ 0.59
Shroom1Q5SX79 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shroom1Q5SX79 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.72■□□□□ 0.59
Shroom1Q5SX79 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Shroom1Q5SX79 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shroom1Q5SX79 Fst-202ENSMUST00000223640 2612 ntBASIC18.71■□□□□ 0.59
Shroom1Q5SX79 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shroom1Q5SX79 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Shroom1Q5SX79 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shroom1Q5SX79 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shroom1Q5SX79 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shroom1Q5SX79 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.71■□□□□ 0.59
Shroom1Q5SX79 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Shroom1Q5SX79 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shroom1Q5SX79 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shroom1Q5SX79 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shroom1Q5SX79 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms