Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC21.2■□□□□ 0.98
Vps54Q5SPW0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC21.2■□□□□ 0.98
Vps54Q5SPW0 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC21.2■□□□□ 0.98
Vps54Q5SPW0 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vps54Q5SPW0 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
Vps54Q5SPW0 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vps54Q5SPW0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vps54Q5SPW0 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vps54Q5SPW0 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vps54Q5SPW0 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Vps54Q5SPW0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Vps54Q5SPW0 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vps54Q5SPW0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vps54Q5SPW0 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vps54Q5SPW0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Vps54Q5SPW0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vps54Q5SPW0 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC21.19■□□□□ 0.98
Vps54Q5SPW0 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Vps54Q5SPW0 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Vps54Q5SPW0 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vps54Q5SPW0 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Vps54Q5SPW0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vps54Q5SPW0 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC21.19■□□□□ 0.98
Vps54Q5SPW0 Arhgef4-208ENSMUST00000211073 171 ntBASIC21.19■□□□□ 0.98
Vps54Q5SPW0 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC21.19■□□□□ 0.98
Vps54Q5SPW0 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vps54Q5SPW0 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vps54Q5SPW0 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC21.19■□□□□ 0.98
Vps54Q5SPW0 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vps54Q5SPW0 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vps54Q5SPW0 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vps54Q5SPW0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vps54Q5SPW0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vps54Q5SPW0 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vps54Q5SPW0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vps54Q5SPW0 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vps54Q5SPW0 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vps54Q5SPW0 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC21.18■□□□□ 0.98
Vps54Q5SPW0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Vps54Q5SPW0 Gm12085-201ENSMUST00000119263 940 ntBASIC21.18■□□□□ 0.98
Vps54Q5SPW0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC21.18■□□□□ 0.98
Vps54Q5SPW0 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vps54Q5SPW0 Gm20472-201ENSMUST00000174403 1240 ntBASIC21.18■□□□□ 0.98
Vps54Q5SPW0 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Vps54Q5SPW0 Gm4974-201ENSMUST00000209974 875 ntBASIC21.18■□□□□ 0.98
Vps54Q5SPW0 Gm5417-201ENSMUST00000079706 384 ntBASIC21.18■□□□□ 0.98
Vps54Q5SPW0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vps54Q5SPW0 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vps54Q5SPW0 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vps54Q5SPW0 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Vps54Q5SPW0 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Vps54Q5SPW0 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Vps54Q5SPW0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vps54Q5SPW0 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vps54Q5SPW0 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC21.17■□□□□ 0.98
Vps54Q5SPW0 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC21.17■□□□□ 0.98
Vps54Q5SPW0 Gm21814-202ENSMUST00000203277 873 ntBASIC21.17■□□□□ 0.98
Vps54Q5SPW0 AC156016.1-201ENSMUST00000227190 1035 ntBASIC21.17■□□□□ 0.98
Vps54Q5SPW0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vps54Q5SPW0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vps54Q5SPW0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC21.17■□□□□ 0.98
Vps54Q5SPW0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vps54Q5SPW0 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vps54Q5SPW0 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC21.17■□□□□ 0.98
Vps54Q5SPW0 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vps54Q5SPW0 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vps54Q5SPW0 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vps54Q5SPW0 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vps54Q5SPW0 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Vps54Q5SPW0 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC21.16■□□□□ 0.98
Vps54Q5SPW0 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC21.16■□□□□ 0.98
Vps54Q5SPW0 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Vps54Q5SPW0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vps54Q5SPW0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC21.15■□□□□ 0.98
Vps54Q5SPW0 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vps54Q5SPW0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC21.15■□□□□ 0.98
Vps54Q5SPW0 Gm9694-201ENSMUST00000193347 1189 ntBASIC21.15■□□□□ 0.98
Vps54Q5SPW0 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vps54Q5SPW0 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vps54Q5SPW0 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Vps54Q5SPW0 Rarb-207ENSMUST00000225921 2756 ntBASIC21.14■□□□□ 0.98
Vps54Q5SPW0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Vps54Q5SPW0 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Vps54Q5SPW0 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC21.14■□□□□ 0.98
Vps54Q5SPW0 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vps54Q5SPW0 Gm15565-201ENSMUST00000118890 427 ntBASIC21.14■□□□□ 0.97
Vps54Q5SPW0 Gm3375-201ENSMUST00000203929 796 ntBASIC21.14■□□□□ 0.97
Vps54Q5SPW0 Timm23-208ENSMUST00000226683 750 ntBASIC21.14■□□□□ 0.97
Vps54Q5SPW0 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Vps54Q5SPW0 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vps54Q5SPW0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vps54Q5SPW0 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vps54Q5SPW0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vps54Q5SPW0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vps54Q5SPW0 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vps54Q5SPW0 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vps54Q5SPW0 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Vps54Q5SPW0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Vps54Q5SPW0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Vps54Q5SPW0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms