Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7d-3Q5R1I1 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7d-3Q5R1I1 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC12.99□□□□□ -0.33
Trav7d-3Q5R1I1 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7d-3Q5R1I1 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7d-3Q5R1I1 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav7d-3Q5R1I1 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7d-3Q5R1I1 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav7d-3Q5R1I1 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7d-3Q5R1I1 AV356131-201ENSMUST00000206201 750 ntBASIC12.99□□□□□ -0.33
Trav7d-3Q5R1I1 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7d-3Q5R1I1 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7d-3Q5R1I1 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7d-3Q5R1I1 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7d-3Q5R1I1 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav7d-3Q5R1I1 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7d-3Q5R1I1 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7d-3Q5R1I1 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7d-3Q5R1I1 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7d-3Q5R1I1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7d-3Q5R1I1 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7d-3Q5R1I1 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7d-3Q5R1I1 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7d-3Q5R1I1 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7d-3Q5R1I1 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7d-3Q5R1I1 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav7d-3Q5R1I1 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav7d-3Q5R1I1 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7d-3Q5R1I1 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7d-3Q5R1I1 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7d-3Q5R1I1 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC12.98□□□□□ -0.33
Trav7d-3Q5R1I1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7d-3Q5R1I1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7d-3Q5R1I1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav7d-3Q5R1I1 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC12.98□□□□□ -0.33
Trav7d-3Q5R1I1 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC12.98□□□□□ -0.33
Trav7d-3Q5R1I1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav7d-3Q5R1I1 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav7d-3Q5R1I1 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7d-3Q5R1I1 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav7d-3Q5R1I1 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7d-3Q5R1I1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav7d-3Q5R1I1 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7d-3Q5R1I1 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7d-3Q5R1I1 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7d-3Q5R1I1 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7d-3Q5R1I1 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7d-3Q5R1I1 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7d-3Q5R1I1 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav7d-3Q5R1I1 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Trav7d-3Q5R1I1 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7d-3Q5R1I1 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7d-3Q5R1I1 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7d-3Q5R1I1 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC12.97□□□□□ -0.33
Trav7d-3Q5R1I1 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC12.97□□□□□ -0.33
Trav7d-3Q5R1I1 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav7d-3Q5R1I1 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7d-3Q5R1I1 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7d-3Q5R1I1 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7d-3Q5R1I1 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7d-3Q5R1I1 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7d-3Q5R1I1 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7d-3Q5R1I1 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7d-3Q5R1I1 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7d-3Q5R1I1 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7d-3Q5R1I1 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7d-3Q5R1I1 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7d-3Q5R1I1 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7d-3Q5R1I1 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7d-3Q5R1I1 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7d-3Q5R1I1 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7d-3Q5R1I1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC12.96□□□□□ -0.33
Trav7d-3Q5R1I1 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav7d-3Q5R1I1 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC12.96□□□□□ -0.33
Trav7d-3Q5R1I1 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC12.96□□□□□ -0.33
Trav7d-3Q5R1I1 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7d-3Q5R1I1 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trav7d-3Q5R1I1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav7d-3Q5R1I1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7d-3Q5R1I1 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7d-3Q5R1I1 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav7d-3Q5R1I1 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav7d-3Q5R1I1 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav7d-3Q5R1I1 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC12.96□□□□□ -0.34
Trav7d-3Q5R1I1 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC12.96□□□□□ -0.34
Trav7d-3Q5R1I1 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav7d-3Q5R1I1 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav7d-3Q5R1I1 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav7d-3Q5R1I1 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7d-3Q5R1I1 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav7d-3Q5R1I1 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7d-3Q5R1I1 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7d-3Q5R1I1 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav7d-3Q5R1I1 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7d-3Q5R1I1 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7d-3Q5R1I1 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7d-3Q5R1I1 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav7d-3Q5R1I1 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC12.95□□□□□ -0.34
Trav7d-3Q5R1I1 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav7d-3Q5R1I1 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms