Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav6d-4Q5R1I0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-4Q5R1I0 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-4Q5R1I0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-4Q5R1I0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-4Q5R1I0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-4Q5R1I0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-4Q5R1I0 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Trav6d-4Q5R1I0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-4Q5R1I0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav6d-4Q5R1I0 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav6d-4Q5R1I0 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Trav6d-4Q5R1I0 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trav6d-4Q5R1I0 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trav6d-4Q5R1I0 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6d-4Q5R1I0 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6d-4Q5R1I0 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6d-4Q5R1I0 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.83□□□□□ -0.04
Trav6d-4Q5R1I0 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6d-4Q5R1I0 Timm23-208ENSMUST00000226683 750 ntBASIC14.83□□□□□ -0.04
Trav6d-4Q5R1I0 Gm5417-201ENSMUST00000079706 384 ntBASIC14.83□□□□□ -0.04
Trav6d-4Q5R1I0 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trav6d-4Q5R1I0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6d-4Q5R1I0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6d-4Q5R1I0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6d-4Q5R1I0 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6d-4Q5R1I0 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trav6d-4Q5R1I0 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6d-4Q5R1I0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trav6d-4Q5R1I0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6d-4Q5R1I0 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6d-4Q5R1I0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6d-4Q5R1I0 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6d-4Q5R1I0 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6d-4Q5R1I0 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6d-4Q5R1I0 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6d-4Q5R1I0 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6d-4Q5R1I0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.82□□□□□ -0.04
Trav6d-4Q5R1I0 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6d-4Q5R1I0 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6d-4Q5R1I0 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6d-4Q5R1I0 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trav6d-4Q5R1I0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Trav6d-4Q5R1I0 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.82□□□□□ -0.04
Trav6d-4Q5R1I0 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6d-4Q5R1I0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6d-4Q5R1I0 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6d-4Q5R1I0 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6d-4Q5R1I0 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Trav6d-4Q5R1I0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6d-4Q5R1I0 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6d-4Q5R1I0 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6d-4Q5R1I0 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6d-4Q5R1I0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6d-4Q5R1I0 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6d-4Q5R1I0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav6d-4Q5R1I0 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav6d-4Q5R1I0 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Trav6d-4Q5R1I0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6d-4Q5R1I0 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav6d-4Q5R1I0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6d-4Q5R1I0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6d-4Q5R1I0 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6d-4Q5R1I0 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Trav6d-4Q5R1I0 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.81□□□□□ -0.04
Trav6d-4Q5R1I0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav6d-4Q5R1I0 Mir7071-201ENSMUST00000184847 69 ntBASIC14.81□□□□□ -0.04
Trav6d-4Q5R1I0 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.81□□□□□ -0.04
Trav6d-4Q5R1I0 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6d-4Q5R1I0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6d-4Q5R1I0 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6d-4Q5R1I0 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav6d-4Q5R1I0 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6d-4Q5R1I0 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6d-4Q5R1I0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trav6d-4Q5R1I0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6d-4Q5R1I0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6d-4Q5R1I0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trav6d-4Q5R1I0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6d-4Q5R1I0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6d-4Q5R1I0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6d-4Q5R1I0 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6d-4Q5R1I0 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6d-4Q5R1I0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6d-4Q5R1I0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav6d-4Q5R1I0 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6d-4Q5R1I0 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6d-4Q5R1I0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav6d-4Q5R1I0 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.8□□□□□ -0.04
Trav6d-4Q5R1I0 Gm13401-201ENSMUST00000117074 291 ntBASIC14.8□□□□□ -0.04
Trav6d-4Q5R1I0 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.8□□□□□ -0.04
Trav6d-4Q5R1I0 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6d-4Q5R1I0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.8□□□□□ -0.04
Trav6d-4Q5R1I0 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.8□□□□□ -0.04
Trav6d-4Q5R1I0 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6d-4Q5R1I0 Gm21814-202ENSMUST00000203277 873 ntBASIC14.8□□□□□ -0.04
Trav6d-4Q5R1I0 Gm4974-201ENSMUST00000209974 875 ntBASIC14.8□□□□□ -0.04
Trav6d-4Q5R1I0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trav6d-4Q5R1I0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.8□□□□□ -0.04
Trav6d-4Q5R1I0 Odf3b-204ENSMUST00000227834 930 ntBASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms