Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav7d-4Q5R1H9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Trav7d-4Q5R1H9 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav7d-4Q5R1H9 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav7d-4Q5R1H9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Trav7d-4Q5R1H9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav7d-4Q5R1H9 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav7d-4Q5R1H9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7d-4Q5R1H9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7d-4Q5R1H9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7d-4Q5R1H9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7d-4Q5R1H9 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7d-4Q5R1H9 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.48□□□□□ -0.25
Trav7d-4Q5R1H9 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7d-4Q5R1H9 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7d-4Q5R1H9 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7d-4Q5R1H9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7d-4Q5R1H9 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7d-4Q5R1H9 CT030146.1-201ENSMUST00000220919 217 ntBASIC13.48□□□□□ -0.25
Trav7d-4Q5R1H9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7d-4Q5R1H9 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC13.48□□□□□ -0.25
Trav7d-4Q5R1H9 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7d-4Q5R1H9 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC13.48□□□□□ -0.25
Trav7d-4Q5R1H9 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7d-4Q5R1H9 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7d-4Q5R1H9 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7d-4Q5R1H9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7d-4Q5R1H9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav7d-4Q5R1H9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7d-4Q5R1H9 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7d-4Q5R1H9 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7d-4Q5R1H9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav7d-4Q5R1H9 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7d-4Q5R1H9 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7d-4Q5R1H9 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7d-4Q5R1H9 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.47□□□□□ -0.25
Trav7d-4Q5R1H9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC13.47□□□□□ -0.25
Trav7d-4Q5R1H9 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7d-4Q5R1H9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7d-4Q5R1H9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
Trav7d-4Q5R1H9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7d-4Q5R1H9 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trav7d-4Q5R1H9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7d-4Q5R1H9 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7d-4Q5R1H9 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.47□□□□□ -0.25
Trav7d-4Q5R1H9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7d-4Q5R1H9 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7d-4Q5R1H9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7d-4Q5R1H9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7d-4Q5R1H9 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Trav7d-4Q5R1H9 Gm8309-201ENSMUST00000206627 1448 ntBASIC13.47□□□□□ -0.25
Trav7d-4Q5R1H9 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7d-4Q5R1H9 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav7d-4Q5R1H9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7d-4Q5R1H9 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav7d-4Q5R1H9 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav7d-4Q5R1H9 Idnk-204ENSMUST00000226010 1898 ntBASIC13.46□□□□□ -0.25
Trav7d-4Q5R1H9 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav7d-4Q5R1H9 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav7d-4Q5R1H9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC13.46□□□□□ -0.25
Trav7d-4Q5R1H9 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav7d-4Q5R1H9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav7d-4Q5R1H9 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav7d-4Q5R1H9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav7d-4Q5R1H9 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trav7d-4Q5R1H9 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav7d-4Q5R1H9 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trav7d-4Q5R1H9 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC13.46□□□□□ -0.26
Trav7d-4Q5R1H9 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav7d-4Q5R1H9 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
Trav7d-4Q5R1H9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.46□□□□□ -0.26
Trav7d-4Q5R1H9 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7d-4Q5R1H9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7d-4Q5R1H9 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7d-4Q5R1H9 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7d-4Q5R1H9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7d-4Q5R1H9 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7d-4Q5R1H9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trav7d-4Q5R1H9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav7d-4Q5R1H9 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7d-4Q5R1H9 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav7d-4Q5R1H9 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trav7d-4Q5R1H9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC13.45□□□□□ -0.26
Trav7d-4Q5R1H9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7d-4Q5R1H9 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7d-4Q5R1H9 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7d-4Q5R1H9 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7d-4Q5R1H9 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.45□□□□□ -0.26
Trav7d-4Q5R1H9 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7d-4Q5R1H9 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7d-4Q5R1H9 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Trav7d-4Q5R1H9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7d-4Q5R1H9 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7d-4Q5R1H9 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7d-4Q5R1H9 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Trav7d-4Q5R1H9 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav7d-4Q5R1H9 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7d-4Q5R1H9 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7d-4Q5R1H9 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7d-4Q5R1H9 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms