Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav8d-1Q5R1H8 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14.47□□□□□ -0.09
Trav8d-1Q5R1H8 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav8d-1Q5R1H8 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.47□□□□□ -0.09
Trav8d-1Q5R1H8 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trav8d-1Q5R1H8 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8d-1Q5R1H8 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8d-1Q5R1H8 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8d-1Q5R1H8 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8d-1Q5R1H8 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8d-1Q5R1H8 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8d-1Q5R1H8 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav8d-1Q5R1H8 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8d-1Q5R1H8 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8d-1Q5R1H8 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8d-1Q5R1H8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trav8d-1Q5R1H8 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8d-1Q5R1H8 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8d-1Q5R1H8 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8d-1Q5R1H8 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8d-1Q5R1H8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8d-1Q5R1H8 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trav8d-1Q5R1H8 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8d-1Q5R1H8 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8d-1Q5R1H8 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8d-1Q5R1H8 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8d-1Q5R1H8 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.46□□□□□ -0.09
Trav8d-1Q5R1H8 Gm13234-201ENSMUST00000120010 747 ntBASIC14.46□□□□□ -0.09
Trav8d-1Q5R1H8 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8d-1Q5R1H8 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8d-1Q5R1H8 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8d-1Q5R1H8 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.46□□□□□ -0.09
Trav8d-1Q5R1H8 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8d-1Q5R1H8 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trav8d-1Q5R1H8 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav8d-1Q5R1H8 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav8d-1Q5R1H8 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.46□□□□□ -0.1
Trav8d-1Q5R1H8 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8d-1Q5R1H8 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav8d-1Q5R1H8 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8d-1Q5R1H8 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC14.45□□□□□ -0.1
Trav8d-1Q5R1H8 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8d-1Q5R1H8 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Trav8d-1Q5R1H8 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8d-1Q5R1H8 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.45□□□□□ -0.1
Trav8d-1Q5R1H8 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Trav8d-1Q5R1H8 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Trav8d-1Q5R1H8 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8d-1Q5R1H8 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav8d-1Q5R1H8 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8d-1Q5R1H8 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8d-1Q5R1H8 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8d-1Q5R1H8 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8d-1Q5R1H8 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8d-1Q5R1H8 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8d-1Q5R1H8 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8d-1Q5R1H8 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8d-1Q5R1H8 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav8d-1Q5R1H8 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8d-1Q5R1H8 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8d-1Q5R1H8 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav8d-1Q5R1H8 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8d-1Q5R1H8 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8d-1Q5R1H8 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8d-1Q5R1H8 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8d-1Q5R1H8 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8d-1Q5R1H8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8d-1Q5R1H8 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8d-1Q5R1H8 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Trav8d-1Q5R1H8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC14.44□□□□□ -0.1
Trav8d-1Q5R1H8 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8d-1Q5R1H8 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8d-1Q5R1H8 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8d-1Q5R1H8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8d-1Q5R1H8 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8d-1Q5R1H8 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8d-1Q5R1H8 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8d-1Q5R1H8 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8d-1Q5R1H8 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8d-1Q5R1H8 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8d-1Q5R1H8 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8d-1Q5R1H8 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8d-1Q5R1H8 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8d-1Q5R1H8 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8d-1Q5R1H8 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8d-1Q5R1H8 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8d-1Q5R1H8 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8d-1Q5R1H8 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8d-1Q5R1H8 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8d-1Q5R1H8 Gm42569-201ENSMUST00000200539 472 ntBASIC14.43□□□□□ -0.1
Trav8d-1Q5R1H8 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8d-1Q5R1H8 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav8d-1Q5R1H8 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8d-1Q5R1H8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trav8d-1Q5R1H8 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8d-1Q5R1H8 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8d-1Q5R1H8 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8d-1Q5R1H8 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8d-1Q5R1H8 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8d-1Q5R1H8 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms