Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Syne3Q4FZC9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Syne3Q4FZC9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Syne3Q4FZC9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Syne3Q4FZC9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Syne3Q4FZC9 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Syne3Q4FZC9 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Syne3Q4FZC9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Syne3Q4FZC9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Syne3Q4FZC9 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Syne3Q4FZC9 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Syne3Q4FZC9 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Syne3Q4FZC9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Syne3Q4FZC9 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Syne3Q4FZC9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Syne3Q4FZC9 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Syne3Q4FZC9 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Syne3Q4FZC9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Syne3Q4FZC9 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Syne3Q4FZC9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Syne3Q4FZC9 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Syne3Q4FZC9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Syne3Q4FZC9 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Syne3Q4FZC9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Syne3Q4FZC9 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Syne3Q4FZC9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Syne3Q4FZC9 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Syne3Q4FZC9 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Syne3Q4FZC9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Syne3Q4FZC9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Syne3Q4FZC9 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Syne3Q4FZC9 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Syne3Q4FZC9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Syne3Q4FZC9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Syne3Q4FZC9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Syne3Q4FZC9 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.71■□□□□ 0.59
Syne3Q4FZC9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Syne3Q4FZC9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Syne3Q4FZC9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Syne3Q4FZC9 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Syne3Q4FZC9 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.71■□□□□ 0.59
Syne3Q4FZC9 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.71■□□□□ 0.59
Syne3Q4FZC9 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Syne3Q4FZC9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Syne3Q4FZC9 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Syne3Q4FZC9 Dio3-201ENSMUST00000097228 1449 ntBASIC18.71■□□□□ 0.59
Syne3Q4FZC9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Syne3Q4FZC9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Syne3Q4FZC9 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Syne3Q4FZC9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Syne3Q4FZC9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Syne3Q4FZC9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.71■□□□□ 0.59
Syne3Q4FZC9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.58
Syne3Q4FZC9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Syne3Q4FZC9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Syne3Q4FZC9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.7■□□□□ 0.58
Syne3Q4FZC9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Syne3Q4FZC9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Syne3Q4FZC9 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Syne3Q4FZC9 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Syne3Q4FZC9 Gm12527-201ENSMUST00000117967 564 ntBASIC18.7■□□□□ 0.58
Syne3Q4FZC9 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Syne3Q4FZC9 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Syne3Q4FZC9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Syne3Q4FZC9 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.7■□□□□ 0.58
Syne3Q4FZC9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Syne3Q4FZC9 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.7■□□□□ 0.58
Syne3Q4FZC9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Syne3Q4FZC9 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Syne3Q4FZC9 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.7■□□□□ 0.58
Syne3Q4FZC9 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Syne3Q4FZC9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Syne3Q4FZC9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Syne3Q4FZC9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Syne3Q4FZC9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Syne3Q4FZC9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Syne3Q4FZC9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Syne3Q4FZC9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Syne3Q4FZC9 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Syne3Q4FZC9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Syne3Q4FZC9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Syne3Q4FZC9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Syne3Q4FZC9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Syne3Q4FZC9 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Syne3Q4FZC9 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Syne3Q4FZC9 Trmt13-210ENSMUST00000198454 880 ntBASIC18.69■□□□□ 0.58
Syne3Q4FZC9 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Syne3Q4FZC9 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.69■□□□□ 0.58
Syne3Q4FZC9 Zfp783-201ENSMUST00000095946 670 ntBASIC18.69■□□□□ 0.58
Syne3Q4FZC9 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.69■□□□□ 0.58
Syne3Q4FZC9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Syne3Q4FZC9 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Syne3Q4FZC9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Syne3Q4FZC9 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.69■□□□□ 0.58
Syne3Q4FZC9 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.69■□□□□ 0.58
Syne3Q4FZC9 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Syne3Q4FZC9 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Syne3Q4FZC9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Syne3Q4FZC9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Syne3Q4FZC9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms