Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ckap2Q3V1H1 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.25■□□□□ 0.83
Ckap2Q3V1H1 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ckap2Q3V1H1 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ckap2Q3V1H1 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Ckap2Q3V1H1 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ckap2Q3V1H1 Gm4974-201ENSMUST00000209974 875 ntBASIC20.25■□□□□ 0.83
Ckap2Q3V1H1 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ckap2Q3V1H1 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ckap2Q3V1H1 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ckap2Q3V1H1 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ckap2Q3V1H1 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ckap2Q3V1H1 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.25■□□□□ 0.83
Ckap2Q3V1H1 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ckap2Q3V1H1 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ckap2Q3V1H1 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ckap2Q3V1H1 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ckap2Q3V1H1 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ckap2Q3V1H1 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.24■□□□□ 0.83
Ckap2Q3V1H1 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ckap2Q3V1H1 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ckap2Q3V1H1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Ckap2Q3V1H1 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ckap2Q3V1H1 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.24■□□□□ 0.83
Ckap2Q3V1H1 Gm10517-202ENSMUST00000192970 758 ntBASIC20.24■□□□□ 0.83
Ckap2Q3V1H1 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.24■□□□□ 0.83
Ckap2Q3V1H1 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.24■□□□□ 0.83
Ckap2Q3V1H1 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ckap2Q3V1H1 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ckap2Q3V1H1 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ckap2Q3V1H1 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ckap2Q3V1H1 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ckap2Q3V1H1 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ckap2Q3V1H1 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.24■□□□□ 0.83
Ckap2Q3V1H1 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.24■□□□□ 0.83
Ckap2Q3V1H1 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ckap2Q3V1H1 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ckap2Q3V1H1 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ckap2Q3V1H1 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ckap2Q3V1H1 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ckap2Q3V1H1 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.23■□□□□ 0.83
Ckap2Q3V1H1 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ckap2Q3V1H1 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.23■□□□□ 0.83
Ckap2Q3V1H1 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ckap2Q3V1H1 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.23■□□□□ 0.83
Ckap2Q3V1H1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ckap2Q3V1H1 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.23■□□□□ 0.83
Ckap2Q3V1H1 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ckap2Q3V1H1 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ckap2Q3V1H1 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ckap2Q3V1H1 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ckap2Q3V1H1 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.23■□□□□ 0.83
Ckap2Q3V1H1 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ckap2Q3V1H1 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ckap2Q3V1H1 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.22■□□□□ 0.83
Ckap2Q3V1H1 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ckap2Q3V1H1 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Ckap2Q3V1H1 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Ckap2Q3V1H1 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ckap2Q3V1H1 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ckap2Q3V1H1 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.22■□□□□ 0.83
Ckap2Q3V1H1 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ckap2Q3V1H1 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Ckap2Q3V1H1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ckap2Q3V1H1 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ckap2Q3V1H1 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ckap2Q3V1H1 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Ckap2Q3V1H1 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Ckap2Q3V1H1 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ckap2Q3V1H1 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ckap2Q3V1H1 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ckap2Q3V1H1 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Ckap2Q3V1H1 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ckap2Q3V1H1 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ckap2Q3V1H1 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ckap2Q3V1H1 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Ckap2Q3V1H1 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ckap2Q3V1H1 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.21■□□□□ 0.83
Ckap2Q3V1H1 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.21■□□□□ 0.83
Ckap2Q3V1H1 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ckap2Q3V1H1 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ckap2Q3V1H1 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ckap2Q3V1H1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ckap2Q3V1H1 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.2■□□□□ 0.82
Ckap2Q3V1H1 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.2■□□□□ 0.82
Ckap2Q3V1H1 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.2■□□□□ 0.82
Ckap2Q3V1H1 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Ckap2Q3V1H1 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ckap2Q3V1H1 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ckap2Q3V1H1 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ckap2Q3V1H1 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ckap2Q3V1H1 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ckap2Q3V1H1 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ckap2Q3V1H1 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ckap2Q3V1H1 Mir1199-201ENSMUST00000117015 119 ntBASIC20.19■□□□□ 0.82
Ckap2Q3V1H1 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ckap2Q3V1H1 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Ckap2Q3V1H1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ckap2Q3V1H1 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.19■□□□□ 0.82
Ckap2Q3V1H1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms