Protein–RNA interactions for Protein: Q3V0X2

Cldn34b4, 4930428D18Rik protein, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn34b4Q3V0X2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cldn34b4Q3V0X2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cldn34b4Q3V0X2 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cldn34b4Q3V0X2 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.57■□□□□ 0.24
Cldn34b4Q3V0X2 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cldn34b4Q3V0X2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn34b4Q3V0X2 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn34b4Q3V0X2 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn34b4Q3V0X2 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn34b4Q3V0X2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn34b4Q3V0X2 Gm5408-201ENSMUST00000197998 747 ntBASIC16.56■□□□□ 0.24
Cldn34b4Q3V0X2 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Cldn34b4Q3V0X2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn34b4Q3V0X2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn34b4Q3V0X2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn34b4Q3V0X2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn34b4Q3V0X2 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn34b4Q3V0X2 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn34b4Q3V0X2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.56■□□□□ 0.24
Cldn34b4Q3V0X2 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Cldn34b4Q3V0X2 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn34b4Q3V0X2 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn34b4Q3V0X2 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn34b4Q3V0X2 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn34b4Q3V0X2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn34b4Q3V0X2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn34b4Q3V0X2 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn34b4Q3V0X2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn34b4Q3V0X2 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Cldn34b4Q3V0X2 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.55■□□□□ 0.24
Cldn34b4Q3V0X2 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn34b4Q3V0X2 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.55■□□□□ 0.24
Cldn34b4Q3V0X2 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.55■□□□□ 0.24
Cldn34b4Q3V0X2 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.55■□□□□ 0.24
Cldn34b4Q3V0X2 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn34b4Q3V0X2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn34b4Q3V0X2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn34b4Q3V0X2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn34b4Q3V0X2 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn34b4Q3V0X2 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn34b4Q3V0X2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn34b4Q3V0X2 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn34b4Q3V0X2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn34b4Q3V0X2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn34b4Q3V0X2 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn34b4Q3V0X2 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn34b4Q3V0X2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn34b4Q3V0X2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
Cldn34b4Q3V0X2 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn34b4Q3V0X2 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn34b4Q3V0X2 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn34b4Q3V0X2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.54■□□□□ 0.24
Cldn34b4Q3V0X2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Cldn34b4Q3V0X2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn34b4Q3V0X2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.54■□□□□ 0.24
Cldn34b4Q3V0X2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn34b4Q3V0X2 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Cldn34b4Q3V0X2 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
Cldn34b4Q3V0X2 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn34b4Q3V0X2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn34b4Q3V0X2 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.54■□□□□ 0.24
Cldn34b4Q3V0X2 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn34b4Q3V0X2 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn34b4Q3V0X2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn34b4Q3V0X2 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn34b4Q3V0X2 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Cldn34b4Q3V0X2 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn34b4Q3V0X2 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Cldn34b4Q3V0X2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Cldn34b4Q3V0X2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn34b4Q3V0X2 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.53■□□□□ 0.24
Cldn34b4Q3V0X2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn34b4Q3V0X2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn34b4Q3V0X2 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn34b4Q3V0X2 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn34b4Q3V0X2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn34b4Q3V0X2 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn34b4Q3V0X2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Cldn34b4Q3V0X2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn34b4Q3V0X2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Cldn34b4Q3V0X2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.53■□□□□ 0.24
Cldn34b4Q3V0X2 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.53■□□□□ 0.24
Cldn34b4Q3V0X2 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn34b4Q3V0X2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn34b4Q3V0X2 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Cldn34b4Q3V0X2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Cldn34b4Q3V0X2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.53■□□□□ 0.24
Cldn34b4Q3V0X2 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn34b4Q3V0X2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn34b4Q3V0X2 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn34b4Q3V0X2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn34b4Q3V0X2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Cldn34b4Q3V0X2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Cldn34b4Q3V0X2 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Cldn34b4Q3V0X2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cldn34b4Q3V0X2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cldn34b4Q3V0X2 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cldn34b4Q3V0X2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cldn34b4Q3V0X2 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cldn34b4Q3V0X2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms