Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.21■□□□□ 0.51
Trim80Q3V061 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim80Q3V061 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim80Q3V061 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
Trim80Q3V061 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Trim80Q3V061 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Trim80Q3V061 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Trim80Q3V061 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim80Q3V061 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim80Q3V061 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim80Q3V061 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim80Q3V061 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim80Q3V061 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim80Q3V061 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim80Q3V061 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim80Q3V061 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim80Q3V061 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim80Q3V061 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim80Q3V061 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim80Q3V061 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim80Q3V061 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Trim80Q3V061 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim80Q3V061 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Trim80Q3V061 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim80Q3V061 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim80Q3V061 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Trim80Q3V061 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim80Q3V061 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
Trim80Q3V061 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim80Q3V061 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim80Q3V061 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.19■□□□□ 0.5
Trim80Q3V061 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.19■□□□□ 0.5
Trim80Q3V061 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.19■□□□□ 0.5
Trim80Q3V061 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.19■□□□□ 0.5
Trim80Q3V061 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Trim80Q3V061 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim80Q3V061 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim80Q3V061 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim80Q3V061 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim80Q3V061 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.19■□□□□ 0.5
Trim80Q3V061 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim80Q3V061 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim80Q3V061 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim80Q3V061 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim80Q3V061 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trim80Q3V061 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim80Q3V061 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim80Q3V061 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim80Q3V061 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim80Q3V061 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim80Q3V061 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.18■□□□□ 0.5
Trim80Q3V061 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Trim80Q3V061 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.18■□□□□ 0.5
Trim80Q3V061 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim80Q3V061 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Trim80Q3V061 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim80Q3V061 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim80Q3V061 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim80Q3V061 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.18■□□□□ 0.5
Trim80Q3V061 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim80Q3V061 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim80Q3V061 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Trim80Q3V061 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim80Q3V061 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim80Q3V061 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim80Q3V061 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim80Q3V061 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim80Q3V061 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trim80Q3V061 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trim80Q3V061 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trim80Q3V061 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.17■□□□□ 0.5
Trim80Q3V061 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.17■□□□□ 0.5
Trim80Q3V061 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.17■□□□□ 0.5
Trim80Q3V061 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Trim80Q3V061 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Trim80Q3V061 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim80Q3V061 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim80Q3V061 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim80Q3V061 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trim80Q3V061 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim80Q3V061 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim80Q3V061 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Trim80Q3V061 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim80Q3V061 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim80Q3V061 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim80Q3V061 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim80Q3V061 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim80Q3V061 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Trim80Q3V061 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim80Q3V061 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim80Q3V061 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim80Q3V061 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim80Q3V061 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Trim80Q3V061 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim80Q3V061 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim80Q3V061 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim80Q3V061 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim80Q3V061 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim80Q3V061 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim80Q3V061 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms