Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.14■□□□□ 0.33
Rnf223Q3UV31 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Rnf223Q3UV31 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf223Q3UV31 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf223Q3UV31 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Rnf223Q3UV31 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf223Q3UV31 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf223Q3UV31 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Rnf223Q3UV31 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf223Q3UV31 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf223Q3UV31 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf223Q3UV31 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf223Q3UV31 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf223Q3UV31 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.14■□□□□ 0.33
Rnf223Q3UV31 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf223Q3UV31 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf223Q3UV31 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf223Q3UV31 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Rnf223Q3UV31 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf223Q3UV31 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf223Q3UV31 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.13■□□□□ 0.33
Rnf223Q3UV31 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf223Q3UV31 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rnf223Q3UV31 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.13■□□□□ 0.33
Rnf223Q3UV31 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.13■□□□□ 0.33
Rnf223Q3UV31 Gm24841-201ENSMUST00000158676 357 ntBASIC17.13■□□□□ 0.33
Rnf223Q3UV31 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf223Q3UV31 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf223Q3UV31 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Rnf223Q3UV31 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Rnf223Q3UV31 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf223Q3UV31 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf223Q3UV31 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf223Q3UV31 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf223Q3UV31 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
Rnf223Q3UV31 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf223Q3UV31 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf223Q3UV31 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.12■□□□□ 0.33
Rnf223Q3UV31 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
Rnf223Q3UV31 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf223Q3UV31 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf223Q3UV31 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf223Q3UV31 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf223Q3UV31 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf223Q3UV31 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Rnf223Q3UV31 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf223Q3UV31 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Rnf223Q3UV31 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf223Q3UV31 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf223Q3UV31 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf223Q3UV31 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf223Q3UV31 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf223Q3UV31 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rnf223Q3UV31 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf223Q3UV31 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf223Q3UV31 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf223Q3UV31 Gm7889-201ENSMUST00000185591 958 ntBASIC17.11■□□□□ 0.33
Rnf223Q3UV31 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.11■□□□□ 0.33
Rnf223Q3UV31 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Rnf223Q3UV31 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf223Q3UV31 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rnf223Q3UV31 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Rnf223Q3UV31 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf223Q3UV31 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf223Q3UV31 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.1■□□□□ 0.33
Rnf223Q3UV31 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf223Q3UV31 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf223Q3UV31 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf223Q3UV31 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Rnf223Q3UV31 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf223Q3UV31 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Rnf223Q3UV31 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf223Q3UV31 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf223Q3UV31 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf223Q3UV31 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf223Q3UV31 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf223Q3UV31 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf223Q3UV31 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf223Q3UV31 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Rnf223Q3UV31 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf223Q3UV31 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.09■□□□□ 0.33
Rnf223Q3UV31 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.09■□□□□ 0.33
Rnf223Q3UV31 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf223Q3UV31 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Rnf223Q3UV31 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Rnf223Q3UV31 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.09■□□□□ 0.33
Rnf223Q3UV31 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rnf223Q3UV31 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rnf223Q3UV31 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf223Q3UV31 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf223Q3UV31 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf223Q3UV31 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Rnf223Q3UV31 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Rnf223Q3UV31 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf223Q3UV31 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.08■□□□□ 0.33
Rnf223Q3UV31 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.08■□□□□ 0.33
Rnf223Q3UV31 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Rnf223Q3UV31 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf223Q3UV31 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf223Q3UV31 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms