Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smcr8Q3UMB5 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smcr8Q3UMB5 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smcr8Q3UMB5 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.96■□□□□ 0.63
Smcr8Q3UMB5 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smcr8Q3UMB5 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smcr8Q3UMB5 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Smcr8Q3UMB5 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
Smcr8Q3UMB5 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smcr8Q3UMB5 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.95■□□□□ 0.62
Smcr8Q3UMB5 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smcr8Q3UMB5 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smcr8Q3UMB5 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smcr8Q3UMB5 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smcr8Q3UMB5 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smcr8Q3UMB5 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smcr8Q3UMB5 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smcr8Q3UMB5 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smcr8Q3UMB5 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Smcr8Q3UMB5 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.94■□□□□ 0.62
Smcr8Q3UMB5 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smcr8Q3UMB5 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Smcr8Q3UMB5 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smcr8Q3UMB5 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smcr8Q3UMB5 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smcr8Q3UMB5 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Smcr8Q3UMB5 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smcr8Q3UMB5 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smcr8Q3UMB5 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smcr8Q3UMB5 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smcr8Q3UMB5 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smcr8Q3UMB5 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
Smcr8Q3UMB5 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.93■□□□□ 0.62
Smcr8Q3UMB5 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smcr8Q3UMB5 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smcr8Q3UMB5 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smcr8Q3UMB5 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smcr8Q3UMB5 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Smcr8Q3UMB5 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Smcr8Q3UMB5 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.93■□□□□ 0.62
Smcr8Q3UMB5 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smcr8Q3UMB5 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smcr8Q3UMB5 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smcr8Q3UMB5 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.93■□□□□ 0.62
Smcr8Q3UMB5 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smcr8Q3UMB5 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Smcr8Q3UMB5 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smcr8Q3UMB5 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smcr8Q3UMB5 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.92■□□□□ 0.62
Smcr8Q3UMB5 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.92■□□□□ 0.62
Smcr8Q3UMB5 Gm11539-201ENSMUST00000119837 557 ntBASIC18.92■□□□□ 0.62
Smcr8Q3UMB5 Gm13436-201ENSMUST00000120418 567 ntBASIC18.92■□□□□ 0.62
Smcr8Q3UMB5 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smcr8Q3UMB5 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smcr8Q3UMB5 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smcr8Q3UMB5 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smcr8Q3UMB5 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smcr8Q3UMB5 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smcr8Q3UMB5 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Smcr8Q3UMB5 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.91■□□□□ 0.62
Smcr8Q3UMB5 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smcr8Q3UMB5 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Smcr8Q3UMB5 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smcr8Q3UMB5 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smcr8Q3UMB5 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smcr8Q3UMB5 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Smcr8Q3UMB5 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.91■□□□□ 0.62
Smcr8Q3UMB5 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smcr8Q3UMB5 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smcr8Q3UMB5 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smcr8Q3UMB5 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Smcr8Q3UMB5 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.91■□□□□ 0.62
Smcr8Q3UMB5 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smcr8Q3UMB5 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.91■□□□□ 0.62
Smcr8Q3UMB5 Gm10231-201ENSMUST00000181584 441 ntBASIC18.91■□□□□ 0.62
Smcr8Q3UMB5 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smcr8Q3UMB5 Gm10517-202ENSMUST00000192970 758 ntBASIC18.91■□□□□ 0.62
Smcr8Q3UMB5 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.91■□□□□ 0.62
Smcr8Q3UMB5 Gm10175-202ENSMUST00000208752 441 ntBASIC18.91■□□□□ 0.62
Smcr8Q3UMB5 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smcr8Q3UMB5 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smcr8Q3UMB5 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smcr8Q3UMB5 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smcr8Q3UMB5 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smcr8Q3UMB5 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.91■□□□□ 0.62
Smcr8Q3UMB5 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smcr8Q3UMB5 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Smcr8Q3UMB5 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.9■□□□□ 0.62
Smcr8Q3UMB5 Gm12085-201ENSMUST00000119263 940 ntBASIC18.9■□□□□ 0.62
Smcr8Q3UMB5 Gm13559-201ENSMUST00000120476 863 ntBASIC18.9■□□□□ 0.62
Smcr8Q3UMB5 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.9■□□□□ 0.62
Smcr8Q3UMB5 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smcr8Q3UMB5 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smcr8Q3UMB5 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Smcr8Q3UMB5 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smcr8Q3UMB5 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smcr8Q3UMB5 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Smcr8Q3UMB5 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smcr8Q3UMB5 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.9■□□□□ 0.62
Smcr8Q3UMB5 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms