Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Cul4aQ3TCH7 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cul4aQ3TCH7 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Cul4aQ3TCH7 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cul4aQ3TCH7 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Cul4aQ3TCH7 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cul4aQ3TCH7 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cul4aQ3TCH7 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Cul4aQ3TCH7 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cul4aQ3TCH7 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cul4aQ3TCH7 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cul4aQ3TCH7 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cul4aQ3TCH7 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Cul4aQ3TCH7 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.55■□□□□ 0.56
Cul4aQ3TCH7 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.55■□□□□ 0.56
Cul4aQ3TCH7 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Cul4aQ3TCH7 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cul4aQ3TCH7 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cul4aQ3TCH7 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Cul4aQ3TCH7 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Cul4aQ3TCH7 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.55■□□□□ 0.56
Cul4aQ3TCH7 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Cul4aQ3TCH7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cul4aQ3TCH7 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cul4aQ3TCH7 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.54■□□□□ 0.56
Cul4aQ3TCH7 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cul4aQ3TCH7 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Cul4aQ3TCH7 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Cul4aQ3TCH7 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cul4aQ3TCH7 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cul4aQ3TCH7 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cul4aQ3TCH7 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cul4aQ3TCH7 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cul4aQ3TCH7 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.54■□□□□ 0.56
Cul4aQ3TCH7 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cul4aQ3TCH7 Mir2861-201ENSMUST00000175539 82 ntBASIC18.54■□□□□ 0.56
Cul4aQ3TCH7 Gm26524-201ENSMUST00000192339 390 ntBASIC18.54■□□□□ 0.56
Cul4aQ3TCH7 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.54■□□□□ 0.56
Cul4aQ3TCH7 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Cul4aQ3TCH7 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.54■□□□□ 0.56
Cul4aQ3TCH7 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cul4aQ3TCH7 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.54■□□□□ 0.56
Cul4aQ3TCH7 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cul4aQ3TCH7 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cul4aQ3TCH7 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cul4aQ3TCH7 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.53■□□□□ 0.56
Cul4aQ3TCH7 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Cul4aQ3TCH7 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cul4aQ3TCH7 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Cul4aQ3TCH7 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cul4aQ3TCH7 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cul4aQ3TCH7 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.53■□□□□ 0.56
Cul4aQ3TCH7 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cul4aQ3TCH7 Gm10418-201ENSMUST00000100943 576 ntBASIC18.53■□□□□ 0.56
Cul4aQ3TCH7 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.53■□□□□ 0.56
Cul4aQ3TCH7 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.53■□□□□ 0.56
Cul4aQ3TCH7 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Cul4aQ3TCH7 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cul4aQ3TCH7 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cul4aQ3TCH7 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cul4aQ3TCH7 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.53■□□□□ 0.56
Cul4aQ3TCH7 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cul4aQ3TCH7 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.53■□□□□ 0.56
Cul4aQ3TCH7 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cul4aQ3TCH7 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Cul4aQ3TCH7 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cul4aQ3TCH7 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Cul4aQ3TCH7 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cul4aQ3TCH7 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Cul4aQ3TCH7 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cul4aQ3TCH7 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cul4aQ3TCH7 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cul4aQ3TCH7 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cul4aQ3TCH7 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cul4aQ3TCH7 Gm18284-201ENSMUST00000172604 624 ntBASIC18.52■□□□□ 0.56
Cul4aQ3TCH7 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.52■□□□□ 0.56
Cul4aQ3TCH7 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cul4aQ3TCH7 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cul4aQ3TCH7 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cul4aQ3TCH7 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cul4aQ3TCH7 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cul4aQ3TCH7 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cul4aQ3TCH7 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cul4aQ3TCH7 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cul4aQ3TCH7 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.51■□□□□ 0.55
Cul4aQ3TCH7 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Cul4aQ3TCH7 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cul4aQ3TCH7 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cul4aQ3TCH7 Gm13148-201ENSMUST00000118892 745 ntBASIC18.51■□□□□ 0.55
Cul4aQ3TCH7 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cul4aQ3TCH7 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cul4aQ3TCH7 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cul4aQ3TCH7 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cul4aQ3TCH7 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Cul4aQ3TCH7 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cul4aQ3TCH7 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cul4aQ3TCH7 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cul4aQ3TCH7 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cul4aQ3TCH7 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cul4aQ3TCH7 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms