Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nhej1Q3KNJ2 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nhej1Q3KNJ2 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Nhej1Q3KNJ2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
Nhej1Q3KNJ2 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.61
Nhej1Q3KNJ2 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.83■□□□□ 0.61
Nhej1Q3KNJ2 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Nhej1Q3KNJ2 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Nhej1Q3KNJ2 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
Nhej1Q3KNJ2 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nhej1Q3KNJ2 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.83■□□□□ 0.6
Nhej1Q3KNJ2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nhej1Q3KNJ2 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nhej1Q3KNJ2 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Nhej1Q3KNJ2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nhej1Q3KNJ2 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nhej1Q3KNJ2 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nhej1Q3KNJ2 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nhej1Q3KNJ2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nhej1Q3KNJ2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nhej1Q3KNJ2 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nhej1Q3KNJ2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nhej1Q3KNJ2 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nhej1Q3KNJ2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nhej1Q3KNJ2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nhej1Q3KNJ2 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nhej1Q3KNJ2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.82■□□□□ 0.6
Nhej1Q3KNJ2 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nhej1Q3KNJ2 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.82■□□□□ 0.6
Nhej1Q3KNJ2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nhej1Q3KNJ2 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nhej1Q3KNJ2 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nhej1Q3KNJ2 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nhej1Q3KNJ2 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.81■□□□□ 0.6
Nhej1Q3KNJ2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nhej1Q3KNJ2 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nhej1Q3KNJ2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.81■□□□□ 0.6
Nhej1Q3KNJ2 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Nhej1Q3KNJ2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nhej1Q3KNJ2 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nhej1Q3KNJ2 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nhej1Q3KNJ2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Nhej1Q3KNJ2 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nhej1Q3KNJ2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nhej1Q3KNJ2 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.81■□□□□ 0.6
Nhej1Q3KNJ2 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nhej1Q3KNJ2 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nhej1Q3KNJ2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.81■□□□□ 0.6
Nhej1Q3KNJ2 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nhej1Q3KNJ2 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nhej1Q3KNJ2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Nhej1Q3KNJ2 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nhej1Q3KNJ2 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nhej1Q3KNJ2 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nhej1Q3KNJ2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nhej1Q3KNJ2 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nhej1Q3KNJ2 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nhej1Q3KNJ2 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nhej1Q3KNJ2 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nhej1Q3KNJ2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Nhej1Q3KNJ2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.8■□□□□ 0.6
Nhej1Q3KNJ2 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.8■□□□□ 0.6
Nhej1Q3KNJ2 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Nhej1Q3KNJ2 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nhej1Q3KNJ2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nhej1Q3KNJ2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nhej1Q3KNJ2 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nhej1Q3KNJ2 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nhej1Q3KNJ2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nhej1Q3KNJ2 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Nhej1Q3KNJ2 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Nhej1Q3KNJ2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nhej1Q3KNJ2 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nhej1Q3KNJ2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nhej1Q3KNJ2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nhej1Q3KNJ2 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nhej1Q3KNJ2 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.79■□□□□ 0.6
Nhej1Q3KNJ2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.79■□□□□ 0.6
Nhej1Q3KNJ2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.79■□□□□ 0.6
Nhej1Q3KNJ2 Gm38285-201ENSMUST00000192928 922 ntBASIC18.79■□□□□ 0.6
Nhej1Q3KNJ2 AV356131-201ENSMUST00000206201 750 ntBASIC18.79■□□□□ 0.6
Nhej1Q3KNJ2 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
Nhej1Q3KNJ2 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nhej1Q3KNJ2 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nhej1Q3KNJ2 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nhej1Q3KNJ2 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nhej1Q3KNJ2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nhej1Q3KNJ2 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nhej1Q3KNJ2 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.78■□□□□ 0.6
Nhej1Q3KNJ2 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nhej1Q3KNJ2 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Nhej1Q3KNJ2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nhej1Q3KNJ2 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.78■□□□□ 0.6
Nhej1Q3KNJ2 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nhej1Q3KNJ2 Gm6365-201ENSMUST00000054711 744 ntBASIC18.78■□□□□ 0.6
Nhej1Q3KNJ2 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nhej1Q3KNJ2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nhej1Q3KNJ2 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Nhej1Q3KNJ2 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nhej1Q3KNJ2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms