Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col19a1Q0VF58 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.86■□□□□ 0.61
Col19a1Q0VF58 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col19a1Q0VF58 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col19a1Q0VF58 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.86■□□□□ 0.61
Col19a1Q0VF58 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Col19a1Q0VF58 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Col19a1Q0VF58 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col19a1Q0VF58 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col19a1Q0VF58 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col19a1Q0VF58 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col19a1Q0VF58 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Col19a1Q0VF58 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col19a1Q0VF58 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col19a1Q0VF58 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col19a1Q0VF58 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col19a1Q0VF58 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Col19a1Q0VF58 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col19a1Q0VF58 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC18.85■□□□□ 0.61
Col19a1Q0VF58 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col19a1Q0VF58 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col19a1Q0VF58 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col19a1Q0VF58 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Col19a1Q0VF58 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.85■□□□□ 0.61
Col19a1Q0VF58 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.85■□□□□ 0.61
Col19a1Q0VF58 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col19a1Q0VF58 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col19a1Q0VF58 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Col19a1Q0VF58 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.84■□□□□ 0.61
Col19a1Q0VF58 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Col19a1Q0VF58 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.84■□□□□ 0.61
Col19a1Q0VF58 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col19a1Q0VF58 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col19a1Q0VF58 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Col19a1Q0VF58 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col19a1Q0VF58 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Col19a1Q0VF58 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC18.84■□□□□ 0.61
Col19a1Q0VF58 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.84■□□□□ 0.61
Col19a1Q0VF58 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
Col19a1Q0VF58 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Col19a1Q0VF58 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.84■□□□□ 0.61
Col19a1Q0VF58 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col19a1Q0VF58 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col19a1Q0VF58 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col19a1Q0VF58 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col19a1Q0VF58 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col19a1Q0VF58 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.83■□□□□ 0.61
Col19a1Q0VF58 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.83■□□□□ 0.61
Col19a1Q0VF58 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC18.83■□□□□ 0.61
Col19a1Q0VF58 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col19a1Q0VF58 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Col19a1Q0VF58 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.83■□□□□ 0.6
Col19a1Q0VF58 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.83■□□□□ 0.6
Col19a1Q0VF58 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.83■□□□□ 0.6
Col19a1Q0VF58 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Col19a1Q0VF58 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col19a1Q0VF58 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Col19a1Q0VF58 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Col19a1Q0VF58 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Col19a1Q0VF58 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col19a1Q0VF58 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col19a1Q0VF58 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Col19a1Q0VF58 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.83■□□□□ 0.6
Col19a1Q0VF58 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.83■□□□□ 0.6
Col19a1Q0VF58 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col19a1Q0VF58 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col19a1Q0VF58 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Col19a1Q0VF58 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col19a1Q0VF58 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col19a1Q0VF58 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Col19a1Q0VF58 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Col19a1Q0VF58 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.82■□□□□ 0.6
Col19a1Q0VF58 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.82■□□□□ 0.6
Col19a1Q0VF58 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.82■□□□□ 0.6
Col19a1Q0VF58 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Col19a1Q0VF58 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col19a1Q0VF58 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Col19a1Q0VF58 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col19a1Q0VF58 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Col19a1Q0VF58 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col19a1Q0VF58 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col19a1Q0VF58 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col19a1Q0VF58 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col19a1Q0VF58 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col19a1Q0VF58 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Col19a1Q0VF58 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col19a1Q0VF58 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Col19a1Q0VF58 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.81■□□□□ 0.6
Col19a1Q0VF58 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col19a1Q0VF58 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col19a1Q0VF58 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Col19a1Q0VF58 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.81■□□□□ 0.6
Col19a1Q0VF58 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col19a1Q0VF58 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col19a1Q0VF58 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col19a1Q0VF58 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col19a1Q0VF58 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Col19a1Q0VF58 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.8■□□□□ 0.6
Col19a1Q0VF58 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col19a1Q0VF58 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms