Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ptchd3Q0EEE2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ptchd3Q0EEE2 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.05■□□□□ 0.32
Ptchd3Q0EEE2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ptchd3Q0EEE2 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ptchd3Q0EEE2 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ptchd3Q0EEE2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ptchd3Q0EEE2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ptchd3Q0EEE2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ptchd3Q0EEE2 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ptchd3Q0EEE2 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.05■□□□□ 0.32
Ptchd3Q0EEE2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.04■□□□□ 0.32
Ptchd3Q0EEE2 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ptchd3Q0EEE2 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Ptchd3Q0EEE2 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ptchd3Q0EEE2 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ptchd3Q0EEE2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Ptchd3Q0EEE2 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ptchd3Q0EEE2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ptchd3Q0EEE2 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ptchd3Q0EEE2 Gm6420-201ENSMUST00000193885 723 ntBASIC17.04■□□□□ 0.32
Ptchd3Q0EEE2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.04■□□□□ 0.32
Ptchd3Q0EEE2 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ptchd3Q0EEE2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ptchd3Q0EEE2 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ptchd3Q0EEE2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ptchd3Q0EEE2 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ptchd3Q0EEE2 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ptchd3Q0EEE2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ptchd3Q0EEE2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Ptchd3Q0EEE2 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Ptchd3Q0EEE2 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ptchd3Q0EEE2 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ptchd3Q0EEE2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ptchd3Q0EEE2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ptchd3Q0EEE2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ptchd3Q0EEE2 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ptchd3Q0EEE2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ptchd3Q0EEE2 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ptchd3Q0EEE2 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ptchd3Q0EEE2 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ptchd3Q0EEE2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ptchd3Q0EEE2 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ptchd3Q0EEE2 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ptchd3Q0EEE2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ptchd3Q0EEE2 Nespas-201ENSMUST00000143738 1083 ntBASIC17.03■□□□□ 0.32
Ptchd3Q0EEE2 Gm8495-201ENSMUST00000188740 694 ntBASIC17.03■□□□□ 0.32
Ptchd3Q0EEE2 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ptchd3Q0EEE2 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ptchd3Q0EEE2 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ptchd3Q0EEE2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ptchd3Q0EEE2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ptchd3Q0EEE2 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.03■□□□□ 0.32
Ptchd3Q0EEE2 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ptchd3Q0EEE2 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ptchd3Q0EEE2 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.03■□□□□ 0.32
Ptchd3Q0EEE2 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ptchd3Q0EEE2 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ptchd3Q0EEE2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.02■□□□□ 0.32
Ptchd3Q0EEE2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ptchd3Q0EEE2 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ptchd3Q0EEE2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ptchd3Q0EEE2 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
Ptchd3Q0EEE2 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ptchd3Q0EEE2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ptchd3Q0EEE2 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ptchd3Q0EEE2 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Ptchd3Q0EEE2 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.01■□□□□ 0.31
Ptchd3Q0EEE2 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ptchd3Q0EEE2 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ptchd3Q0EEE2 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ptchd3Q0EEE2 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ptchd3Q0EEE2 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ptchd3Q0EEE2 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ptchd3Q0EEE2 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.01■□□□□ 0.31
Ptchd3Q0EEE2 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.01■□□□□ 0.31
Ptchd3Q0EEE2 Gm42569-201ENSMUST00000200539 472 ntBASIC17.01■□□□□ 0.31
Ptchd3Q0EEE2 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ptchd3Q0EEE2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ptchd3Q0EEE2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.01■□□□□ 0.31
Ptchd3Q0EEE2 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Ptchd3Q0EEE2 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.01■□□□□ 0.31
Ptchd3Q0EEE2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Ptchd3Q0EEE2 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Ptchd3Q0EEE2 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ptchd3Q0EEE2 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ptchd3Q0EEE2 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Ptchd3Q0EEE2 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ptchd3Q0EEE2 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17■□□□□ 0.31
Ptchd3Q0EEE2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ptchd3Q0EEE2 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ptchd3Q0EEE2 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ptchd3Q0EEE2 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Ptchd3Q0EEE2 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ptchd3Q0EEE2 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ptchd3Q0EEE2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ptchd3Q0EEE2 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ptchd3Q0EEE2 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ptchd3Q0EEE2 Gm10655-201ENSMUST00000098658 1397 ntBASIC17■□□□□ 0.31
Ptchd3Q0EEE2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms