Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chd8Q09XV5 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Chd8Q09XV5 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chd8Q09XV5 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chd8Q09XV5 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC15.87■□□□□ 0.13
Chd8Q09XV5 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chd8Q09XV5 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.87■□□□□ 0.13
Chd8Q09XV5 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Chd8Q09XV5 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Chd8Q09XV5 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chd8Q09XV5 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.86■□□□□ 0.13
Chd8Q09XV5 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chd8Q09XV5 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Chd8Q09XV5 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chd8Q09XV5 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Chd8Q09XV5 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Chd8Q09XV5 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chd8Q09XV5 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.86■□□□□ 0.13
Chd8Q09XV5 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chd8Q09XV5 Gm13401-201ENSMUST00000117074 291 ntBASIC15.86■□□□□ 0.13
Chd8Q09XV5 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chd8Q09XV5 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.86■□□□□ 0.13
Chd8Q09XV5 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chd8Q09XV5 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Chd8Q09XV5 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Chd8Q09XV5 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Chd8Q09XV5 Gm4974-201ENSMUST00000209974 875 ntBASIC15.85■□□□□ 0.13
Chd8Q09XV5 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.85■□□□□ 0.13
Chd8Q09XV5 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chd8Q09XV5 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.85■□□□□ 0.13
Chd8Q09XV5 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chd8Q09XV5 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chd8Q09XV5 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chd8Q09XV5 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Chd8Q09XV5 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chd8Q09XV5 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chd8Q09XV5 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC15.85■□□□□ 0.13
Chd8Q09XV5 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC15.85■□□□□ 0.13
Chd8Q09XV5 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.85■□□□□ 0.13
Chd8Q09XV5 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chd8Q09XV5 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chd8Q09XV5 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Chd8Q09XV5 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chd8Q09XV5 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chd8Q09XV5 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chd8Q09XV5 Gm4535-201ENSMUST00000182274 558 ntBASIC15.84■□□□□ 0.13
Chd8Q09XV5 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chd8Q09XV5 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chd8Q09XV5 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chd8Q09XV5 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chd8Q09XV5 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chd8Q09XV5 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chd8Q09XV5 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chd8Q09XV5 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Chd8Q09XV5 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chd8Q09XV5 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.84■□□□□ 0.13
Chd8Q09XV5 Mir3113-201ENSMUST00000175478 76 ntBASIC15.84■□□□□ 0.13
Chd8Q09XV5 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chd8Q09XV5 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chd8Q09XV5 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chd8Q09XV5 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chd8Q09XV5 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chd8Q09XV5 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chd8Q09XV5 Gm12260-201ENSMUST00000122447 411 ntBASIC15.83■□□□□ 0.13
Chd8Q09XV5 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.83■□□□□ 0.13
Chd8Q09XV5 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.83■□□□□ 0.13
Chd8Q09XV5 Mir7023-201ENSMUST00000185093 64 ntBASIC15.83■□□□□ 0.13
Chd8Q09XV5 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Chd8Q09XV5 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.13
Chd8Q09XV5 Gm20634-201ENSMUST00000090779 2956 ntBASIC15.83■□□□□ 0.13
Chd8Q09XV5 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Chd8Q09XV5 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chd8Q09XV5 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chd8Q09XV5 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chd8Q09XV5 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC15.83■□□□□ 0.12
Chd8Q09XV5 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Chd8Q09XV5 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.83■□□□□ 0.12
Chd8Q09XV5 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chd8Q09XV5 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chd8Q09XV5 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chd8Q09XV5 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chd8Q09XV5 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chd8Q09XV5 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.83■□□□□ 0.12
Chd8Q09XV5 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chd8Q09XV5 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chd8Q09XV5 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.82■□□□□ 0.12
Chd8Q09XV5 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chd8Q09XV5 Il3ra-202ENSMUST00000223589 738 ntBASIC15.82■□□□□ 0.12
Chd8Q09XV5 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Chd8Q09XV5 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chd8Q09XV5 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chd8Q09XV5 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chd8Q09XV5 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Chd8Q09XV5 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Chd8Q09XV5 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chd8Q09XV5 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chd8Q09XV5 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chd8Q09XV5 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chd8Q09XV5 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Chd8Q09XV5 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms