Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hspg2Q05793 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hspg2Q05793 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hspg2Q05793 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.06□□□□□ -0.32
Hspg2Q05793 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.06□□□□□ -0.32
Hspg2Q05793 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.06□□□□□ -0.32
Hspg2Q05793 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Hspg2Q05793 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Hspg2Q05793 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Hspg2Q05793 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Hspg2Q05793 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hspg2Q05793 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.06□□□□□ -0.32
Hspg2Q05793 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hspg2Q05793 AC121961.1-201ENSMUST00000218594 1779 ntBASIC13.06□□□□□ -0.32
Hspg2Q05793 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hspg2Q05793 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC13.06□□□□□ -0.32
Hspg2Q05793 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Hspg2Q05793 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Hspg2Q05793 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Hspg2Q05793 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hspg2Q05793 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hspg2Q05793 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Hspg2Q05793 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hspg2Q05793 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.06□□□□□ -0.32
Hspg2Q05793 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hspg2Q05793 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hspg2Q05793 Tgds-204ENSMUST00000228543 1594 ntBASIC13.05□□□□□ -0.32
Hspg2Q05793 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Hspg2Q05793 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hspg2Q05793 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Hspg2Q05793 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hspg2Q05793 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Hspg2Q05793 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hspg2Q05793 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hspg2Q05793 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hspg2Q05793 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hspg2Q05793 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Hspg2Q05793 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.05□□□□□ -0.32
Hspg2Q05793 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hspg2Q05793 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hspg2Q05793 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hspg2Q05793 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hspg2Q05793 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hspg2Q05793 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Hspg2Q05793 Fam105a-203ENSMUST00000226170 3043 ntBASIC13.04□□□□□ -0.32
Hspg2Q05793 Gm7638-201ENSMUST00000121348 967 ntBASIC13.04□□□□□ -0.32
Hspg2Q05793 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hspg2Q05793 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hspg2Q05793 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hspg2Q05793 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hspg2Q05793 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hspg2Q05793 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hspg2Q05793 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hspg2Q05793 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hspg2Q05793 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hspg2Q05793 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hspg2Q05793 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hspg2Q05793 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hspg2Q05793 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hspg2Q05793 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hspg2Q05793 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hspg2Q05793 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hspg2Q05793 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hspg2Q05793 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hspg2Q05793 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hspg2Q05793 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hspg2Q05793 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hspg2Q05793 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.03□□□□□ -0.32
Hspg2Q05793 Gm28659-201ENSMUST00000188013 759 ntBASIC13.03□□□□□ -0.32
Hspg2Q05793 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hspg2Q05793 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hspg2Q05793 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.03□□□□□ -0.32
Hspg2Q05793 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hspg2Q05793 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hspg2Q05793 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Hspg2Q05793 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hspg2Q05793 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.02□□□□□ -0.32
Hspg2Q05793 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Hspg2Q05793 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Hspg2Q05793 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Hspg2Q05793 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hspg2Q05793 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hspg2Q05793 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.02□□□□□ -0.32
Hspg2Q05793 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hspg2Q05793 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hspg2Q05793 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Hspg2Q05793 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hspg2Q05793 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hspg2Q05793 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hspg2Q05793 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hspg2Q05793 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hspg2Q05793 Gm17808-201ENSMUST00000200859 894 ntBASIC13.02□□□□□ -0.33
Hspg2Q05793 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Hspg2Q05793 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC13.02□□□□□ -0.33
Hspg2Q05793 Mir8098-201ENSMUST00000184011 137 ntBASIC13.02□□□□□ -0.33
Hspg2Q05793 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.02□□□□□ -0.33
Hspg2Q05793 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hspg2Q05793 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hspg2Q05793 Gm5784-201ENSMUST00000179344 2478 ntBASIC13.02□□□□□ -0.33
Hspg2Q05793 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms