Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx3-2P97503 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx3-2P97503 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx3-2P97503 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx3-2P97503 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Nkx3-2P97503 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.65■□□□□ 0.26
Nkx3-2P97503 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.65■□□□□ 0.26
Nkx3-2P97503 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.65■□□□□ 0.26
Nkx3-2P97503 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Nkx3-2P97503 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx3-2P97503 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx3-2P97503 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx3-2P97503 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx3-2P97503 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx3-2P97503 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx3-2P97503 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx3-2P97503 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx3-2P97503 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Nkx3-2P97503 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx3-2P97503 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx3-2P97503 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx3-2P97503 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx3-2P97503 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Nkx3-2P97503 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx3-2P97503 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.64■□□□□ 0.25
Nkx3-2P97503 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx3-2P97503 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.64■□□□□ 0.25
Nkx3-2P97503 Mir7071-201ENSMUST00000184847 69 ntBASIC16.64■□□□□ 0.25
Nkx3-2P97503 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx3-2P97503 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Nkx3-2P97503 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx3-2P97503 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx3-2P97503 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.64■□□□□ 0.25
Nkx3-2P97503 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Nkx3-2P97503 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx3-2P97503 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx3-2P97503 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx3-2P97503 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Nkx3-2P97503 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx3-2P97503 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx3-2P97503 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.63■□□□□ 0.25
Nkx3-2P97503 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx3-2P97503 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx3-2P97503 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.63■□□□□ 0.25
Nkx3-2P97503 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.63■□□□□ 0.25
Nkx3-2P97503 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Nkx3-2P97503 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.63■□□□□ 0.25
Nkx3-2P97503 Gm37292-201ENSMUST00000192062 758 ntBASIC16.63■□□□□ 0.25
Nkx3-2P97503 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx3-2P97503 Gm21814-202ENSMUST00000203277 873 ntBASIC16.63■□□□□ 0.25
Nkx3-2P97503 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx3-2P97503 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx3-2P97503 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx3-2P97503 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx3-2P97503 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Nkx3-2P97503 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx3-2P97503 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx3-2P97503 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx3-2P97503 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx3-2P97503 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx3-2P97503 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx3-2P97503 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Nkx3-2P97503 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx3-2P97503 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.62■□□□□ 0.25
Nkx3-2P97503 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx3-2P97503 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.62■□□□□ 0.25
Nkx3-2P97503 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx3-2P97503 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx3-2P97503 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Nkx3-2P97503 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx3-2P97503 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx3-2P97503 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx3-2P97503 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx3-2P97503 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Nkx3-2P97503 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx3-2P97503 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Nkx3-2P97503 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx3-2P97503 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx3-2P97503 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx3-2P97503 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx3-2P97503 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Nkx3-2P97503 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Nkx3-2P97503 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nkx3-2P97503 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx3-2P97503 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.61■□□□□ 0.25
Nkx3-2P97503 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx3-2P97503 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx3-2P97503 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx3-2P97503 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx3-2P97503 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Nkx3-2P97503 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx3-2P97503 Mir2861-201ENSMUST00000175539 82 ntBASIC16.61■□□□□ 0.25
Nkx3-2P97503 Gm42545-201ENSMUST00000202755 922 ntBASIC16.61■□□□□ 0.25
Nkx3-2P97503 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.61■□□□□ 0.25
Nkx3-2P97503 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Nkx3-2P97503 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx3-2P97503 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx3-2P97503 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx3-2P97503 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkx3-2P97503 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms