Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CiitaP79621 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CiitaP79621 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CiitaP79621 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CiitaP79621 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CiitaP79621 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CiitaP79621 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
CiitaP79621 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CiitaP79621 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CiitaP79621 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.15■□□□□ 0.66
CiitaP79621 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CiitaP79621 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CiitaP79621 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CiitaP79621 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.15■□□□□ 0.66
CiitaP79621 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CiitaP79621 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CiitaP79621 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CiitaP79621 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CiitaP79621 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CiitaP79621 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CiitaP79621 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CiitaP79621 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CiitaP79621 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CiitaP79621 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CiitaP79621 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CiitaP79621 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CiitaP79621 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CiitaP79621 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CiitaP79621 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
CiitaP79621 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CiitaP79621 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CiitaP79621 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.15■□□□□ 0.66
CiitaP79621 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
CiitaP79621 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CiitaP79621 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CiitaP79621 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CiitaP79621 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CiitaP79621 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
CiitaP79621 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
CiitaP79621 Gm24841-201ENSMUST00000158676 357 ntBASIC19.14■□□□□ 0.65
CiitaP79621 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.14■□□□□ 0.65
CiitaP79621 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CiitaP79621 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CiitaP79621 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CiitaP79621 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CiitaP79621 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CiitaP79621 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CiitaP79621 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CiitaP79621 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.14■□□□□ 0.65
CiitaP79621 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CiitaP79621 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CiitaP79621 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CiitaP79621 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CiitaP79621 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CiitaP79621 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CiitaP79621 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CiitaP79621 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CiitaP79621 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CiitaP79621 Gm9987-201ENSMUST00000069768 567 ntBASIC19.13■□□□□ 0.65
CiitaP79621 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CiitaP79621 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.13■□□□□ 0.65
CiitaP79621 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CiitaP79621 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CiitaP79621 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CiitaP79621 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CiitaP79621 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CiitaP79621 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.13■□□□□ 0.65
CiitaP79621 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CiitaP79621 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CiitaP79621 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CiitaP79621 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CiitaP79621 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CiitaP79621 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CiitaP79621 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CiitaP79621 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
CiitaP79621 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CiitaP79621 Gm13836-201ENSMUST00000121159 501 ntBASIC19.12■□□□□ 0.65
CiitaP79621 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.12■□□□□ 0.65
CiitaP79621 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CiitaP79621 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CiitaP79621 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CiitaP79621 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.12■□□□□ 0.65
CiitaP79621 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.11■□□□□ 0.65
CiitaP79621 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CiitaP79621 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CiitaP79621 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
CiitaP79621 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CiitaP79621 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CiitaP79621 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CiitaP79621 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
CiitaP79621 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CiitaP79621 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CiitaP79621 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CiitaP79621 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CiitaP79621 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CiitaP79621 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CiitaP79621 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CiitaP79621 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CiitaP79621 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CiitaP79621 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms