Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lmo4P61969 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Lmo4P61969 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Lmo4P61969 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lmo4P61969 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lmo4P61969 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lmo4P61969 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lmo4P61969 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lmo4P61969 Gm16061-201ENSMUST00000122167 857 ntBASIC14.29□□□□□ -0.12
Lmo4P61969 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.29□□□□□ -0.12
Lmo4P61969 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lmo4P61969 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.29□□□□□ -0.12
Lmo4P61969 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lmo4P61969 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lmo4P61969 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lmo4P61969 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lmo4P61969 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lmo4P61969 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lmo4P61969 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lmo4P61969 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lmo4P61969 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Lmo4P61969 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lmo4P61969 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lmo4P61969 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.29□□□□□ -0.12
Lmo4P61969 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lmo4P61969 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Lmo4P61969 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lmo4P61969 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Lmo4P61969 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lmo4P61969 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lmo4P61969 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lmo4P61969 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lmo4P61969 Gm22697-201ENSMUST00000175194 63 ntBASIC14.28□□□□□ -0.12
Lmo4P61969 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lmo4P61969 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lmo4P61969 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lmo4P61969 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lmo4P61969 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lmo4P61969 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Lmo4P61969 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lmo4P61969 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Lmo4P61969 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Lmo4P61969 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Lmo4P61969 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lmo4P61969 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lmo4P61969 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Lmo4P61969 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lmo4P61969 Gm37025-201ENSMUST00000195159 829 ntBASIC14.27□□□□□ -0.13
Lmo4P61969 Gm18101-201ENSMUST00000215769 548 ntBASIC14.27□□□□□ -0.13
Lmo4P61969 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lmo4P61969 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lmo4P61969 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Lmo4P61969 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lmo4P61969 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC14.27□□□□□ -0.13
Lmo4P61969 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lmo4P61969 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lmo4P61969 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lmo4P61969 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lmo4P61969 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lmo4P61969 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lmo4P61969 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lmo4P61969 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lmo4P61969 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Lmo4P61969 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lmo4P61969 Gm13474-201ENSMUST00000122466 815 ntBASIC14.26□□□□□ -0.13
Lmo4P61969 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lmo4P61969 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Lmo4P61969 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.26□□□□□ -0.13
Lmo4P61969 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.26□□□□□ -0.13
Lmo4P61969 Gm9731-201ENSMUST00000209480 747 ntBASIC14.26□□□□□ -0.13
Lmo4P61969 Il3ra-202ENSMUST00000223589 738 ntBASIC14.26□□□□□ -0.13
Lmo4P61969 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Lmo4P61969 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lmo4P61969 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lmo4P61969 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Lmo4P61969 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.25□□□□□ -0.13
Lmo4P61969 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lmo4P61969 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lmo4P61969 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lmo4P61969 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lmo4P61969 Idnk-204ENSMUST00000226010 1898 ntBASIC14.25□□□□□ -0.13
Lmo4P61969 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lmo4P61969 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lmo4P61969 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lmo4P61969 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lmo4P61969 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Lmo4P61969 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.25□□□□□ -0.13
Lmo4P61969 Gm21362-201ENSMUST00000194272 928 ntBASIC14.25□□□□□ -0.13
Lmo4P61969 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lmo4P61969 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lmo4P61969 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lmo4P61969 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lmo4P61969 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lmo4P61969 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lmo4P61969 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lmo4P61969 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lmo4P61969 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lmo4P61969 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lmo4P61969 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lmo4P61969 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms