Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nup43P59235 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Nup43P59235 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.68■□□□□ 0.26
Nup43P59235 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nup43P59235 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nup43P59235 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nup43P59235 Gm11643-201ENSMUST00000119578 864 ntBASIC16.68■□□□□ 0.26
Nup43P59235 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nup43P59235 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.68■□□□□ 0.26
Nup43P59235 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nup43P59235 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nup43P59235 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Nup43P59235 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nup43P59235 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nup43P59235 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.68■□□□□ 0.26
Nup43P59235 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nup43P59235 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nup43P59235 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nup43P59235 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nup43P59235 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nup43P59235 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nup43P59235 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.67■□□□□ 0.26
Nup43P59235 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nup43P59235 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nup43P59235 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Nup43P59235 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nup43P59235 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nup43P59235 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nup43P59235 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Nup43P59235 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nup43P59235 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nup43P59235 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.67■□□□□ 0.26
Nup43P59235 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nup43P59235 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nup43P59235 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nup43P59235 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nup43P59235 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nup43P59235 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nup43P59235 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nup43P59235 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nup43P59235 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nup43P59235 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Nup43P59235 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nup43P59235 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nup43P59235 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.66■□□□□ 0.26
Nup43P59235 Gm43183-201ENSMUST00000200632 547 ntBASIC16.66■□□□□ 0.26
Nup43P59235 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.66■□□□□ 0.26
Nup43P59235 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nup43P59235 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nup43P59235 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nup43P59235 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nup43P59235 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nup43P59235 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nup43P59235 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nup43P59235 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Nup43P59235 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup43P59235 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.65■□□□□ 0.26
Nup43P59235 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup43P59235 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup43P59235 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup43P59235 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup43P59235 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nup43P59235 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Nup43P59235 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup43P59235 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup43P59235 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup43P59235 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.65■□□□□ 0.26
Nup43P59235 Gm12382-201ENSMUST00000122005 922 ntBASIC16.65■□□□□ 0.26
Nup43P59235 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nup43P59235 Gm37292-201ENSMUST00000192062 758 ntBASIC16.65■□□□□ 0.26
Nup43P59235 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Nup43P59235 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.65■□□□□ 0.26
Nup43P59235 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup43P59235 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.65■□□□□ 0.26
Nup43P59235 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nup43P59235 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nup43P59235 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.65■□□□□ 0.26
Nup43P59235 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.26
Nup43P59235 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nup43P59235 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Nup43P59235 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Nup43P59235 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.64■□□□□ 0.25
Nup43P59235 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.64■□□□□ 0.25
Nup43P59235 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.64■□□□□ 0.25
Nup43P59235 Gm10812-201ENSMUST00000099864 546 ntBASIC16.64■□□□□ 0.25
Nup43P59235 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup43P59235 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nup43P59235 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nup43P59235 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nup43P59235 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nup43P59235 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nup43P59235 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nup43P59235 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nup43P59235 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nup43P59235 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nup43P59235 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nup43P59235 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.63■□□□□ 0.25
Nup43P59235 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.63■□□□□ 0.25
Nup43P59235 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nup43P59235 Gm6576-201ENSMUST00000169678 883 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms