Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Tubgcp3P58854 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tubgcp3P58854 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.02■□□□□ 0.48
Tubgcp3P58854 Gm11927-201ENSMUST00000118472 759 ntBASIC18.02■□□□□ 0.48
Tubgcp3P58854 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.02■□□□□ 0.48
Tubgcp3P58854 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.02■□□□□ 0.48
Tubgcp3P58854 Gm2559-201ENSMUST00000201323 363 ntBASIC18.02■□□□□ 0.48
Tubgcp3P58854 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tubgcp3P58854 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Tubgcp3P58854 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tubgcp3P58854 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tubgcp3P58854 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Tubgcp3P58854 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Tubgcp3P58854 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tubgcp3P58854 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tubgcp3P58854 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Tubgcp3P58854 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Tubgcp3P58854 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Tubgcp3P58854 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tubgcp3P58854 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tubgcp3P58854 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tubgcp3P58854 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tubgcp3P58854 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.01■□□□□ 0.47
Tubgcp3P58854 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Tubgcp3P58854 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.01■□□□□ 0.47
Tubgcp3P58854 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.01■□□□□ 0.47
Tubgcp3P58854 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tubgcp3P58854 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tubgcp3P58854 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tubgcp3P58854 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18■□□□□ 0.47
Tubgcp3P58854 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tubgcp3P58854 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Tubgcp3P58854 Gm43702-201ENSMUST00000198772 2546 ntBASIC18■□□□□ 0.47
Tubgcp3P58854 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Tubgcp3P58854 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tubgcp3P58854 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18■□□□□ 0.47
Tubgcp3P58854 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tubgcp3P58854 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Tubgcp3P58854 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18■□□□□ 0.47
Tubgcp3P58854 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18■□□□□ 0.47
Tubgcp3P58854 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tubgcp3P58854 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Tubgcp3P58854 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tubgcp3P58854 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Tubgcp3P58854 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tubgcp3P58854 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18■□□□□ 0.47
Tubgcp3P58854 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tubgcp3P58854 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Tubgcp3P58854 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tubgcp3P58854 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tubgcp3P58854 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.99■□□□□ 0.47
Tubgcp3P58854 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tubgcp3P58854 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tubgcp3P58854 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tubgcp3P58854 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tubgcp3P58854 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tubgcp3P58854 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tubgcp3P58854 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tubgcp3P58854 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.99■□□□□ 0.47
Tubgcp3P58854 Gm4968-201ENSMUST00000071458 858 ntBASIC17.99■□□□□ 0.47
Tubgcp3P58854 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Tubgcp3P58854 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tubgcp3P58854 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tubgcp3P58854 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tubgcp3P58854 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tubgcp3P58854 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tubgcp3P58854 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tubgcp3P58854 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tubgcp3P58854 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tubgcp3P58854 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.98■□□□□ 0.47
Tubgcp3P58854 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tubgcp3P58854 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Tubgcp3P58854 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tubgcp3P58854 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tubgcp3P58854 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tubgcp3P58854 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tubgcp3P58854 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.98■□□□□ 0.47
Tubgcp3P58854 Mtag2-201ENSMUST00000058665 714 ntBASIC17.98■□□□□ 0.47
Tubgcp3P58854 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tubgcp3P58854 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.98■□□□□ 0.47
Tubgcp3P58854 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tubgcp3P58854 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tubgcp3P58854 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tubgcp3P58854 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tubgcp3P58854 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tubgcp3P58854 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tubgcp3P58854 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tubgcp3P58854 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tubgcp3P58854 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tubgcp3P58854 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tubgcp3P58854 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.97■□□□□ 0.47
Tubgcp3P58854 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tubgcp3P58854 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tubgcp3P58854 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tubgcp3P58854 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tubgcp3P58854 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tubgcp3P58854 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Tubgcp3P58854 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tubgcp3P58854 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tubgcp3P58854 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 198.6 ms