Protein–RNA interactions for Protein: P57748

Mmp20, Matrix metalloproteinase-20, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp20P57748 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp20P57748 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp20P57748 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp20P57748 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Mmp20P57748 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC20.22■□□□□ 0.83
Mmp20P57748 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Mmp20P57748 Gm11355-201ENSMUST00000121120 306 ntBASIC20.22■□□□□ 0.83
Mmp20P57748 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC20.22■□□□□ 0.83
Mmp20P57748 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp20P57748 Gm28033-201ENSMUST00000184224 96 ntBASIC20.22■□□□□ 0.83
Mmp20P57748 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp20P57748 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp20P57748 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.22■□□□□ 0.83
Mmp20P57748 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.22■□□□□ 0.83
Mmp20P57748 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp20P57748 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp20P57748 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp20P57748 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Mmp20P57748 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp20P57748 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp20P57748 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.21■□□□□ 0.83
Mmp20P57748 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp20P57748 Gm17807-201ENSMUST00000186869 298 ntBASIC20.21■□□□□ 0.83
Mmp20P57748 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp20P57748 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp20P57748 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp20P57748 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp20P57748 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp20P57748 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp20P57748 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp20P57748 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.83
Mmp20P57748 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp20P57748 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp20P57748 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Mmp20P57748 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp20P57748 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp20P57748 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp20P57748 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Mmp20P57748 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp20P57748 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Mmp20P57748 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp20P57748 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Mmp20P57748 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Mmp20P57748 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Mmp20P57748 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp20P57748 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp20P57748 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp20P57748 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp20P57748 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp20P57748 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Mmp20P57748 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.19■□□□□ 0.82
Mmp20P57748 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp20P57748 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp20P57748 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp20P57748 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp20P57748 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp20P57748 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp20P57748 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Mmp20P57748 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp20P57748 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp20P57748 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Mmp20P57748 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp20P57748 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp20P57748 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp20P57748 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp20P57748 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp20P57748 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Mmp20P57748 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp20P57748 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp20P57748 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp20P57748 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp20P57748 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Mmp20P57748 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp20P57748 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp20P57748 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp20P57748 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp20P57748 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Mmp20P57748 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp20P57748 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp20P57748 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp20P57748 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.17■□□□□ 0.82
Mmp20P57748 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp20P57748 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Mmp20P57748 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp20P57748 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp20P57748 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Mmp20P57748 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp20P57748 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp20P57748 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp20P57748 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.16■□□□□ 0.82
Mmp20P57748 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp20P57748 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Mmp20P57748 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC20.16■□□□□ 0.82
Mmp20P57748 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp20P57748 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp20P57748 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp20P57748 Notumos-201ENSMUST00000151998 2659 ntBASIC20.16■□□□□ 0.82
Mmp20P57748 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
Mmp20P57748 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp20P57748 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms