Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sssca1P56873 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.29□□□□□ -0.12
Sssca1P56873 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sssca1P56873 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sssca1P56873 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sssca1P56873 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC14.29□□□□□ -0.12
Sssca1P56873 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sssca1P56873 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sssca1P56873 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sssca1P56873 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Sssca1P56873 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sssca1P56873 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Sssca1P56873 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sssca1P56873 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sssca1P56873 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sssca1P56873 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sssca1P56873 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Sssca1P56873 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sssca1P56873 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Sssca1P56873 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC14.28□□□□□ -0.12
Sssca1P56873 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sssca1P56873 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sssca1P56873 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sssca1P56873 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sssca1P56873 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sssca1P56873 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sssca1P56873 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sssca1P56873 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sssca1P56873 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sssca1P56873 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sssca1P56873 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Sssca1P56873 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sssca1P56873 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sssca1P56873 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
Sssca1P56873 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sssca1P56873 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sssca1P56873 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sssca1P56873 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sssca1P56873 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Sssca1P56873 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sssca1P56873 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Sssca1P56873 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Sssca1P56873 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC14.27□□□□□ -0.13
Sssca1P56873 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sssca1P56873 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sssca1P56873 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sssca1P56873 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sssca1P56873 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sssca1P56873 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sssca1P56873 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sssca1P56873 Gm43672-201ENSMUST00000199072 1731 ntBASIC14.27□□□□□ -0.13
Sssca1P56873 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sssca1P56873 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.26□□□□□ -0.13
Sssca1P56873 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sssca1P56873 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sssca1P56873 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sssca1P56873 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sssca1P56873 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Sssca1P56873 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Sssca1P56873 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sssca1P56873 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sssca1P56873 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Sssca1P56873 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sssca1P56873 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Sssca1P56873 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Sssca1P56873 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Sssca1P56873 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.26□□□□□ -0.13
Sssca1P56873 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sssca1P56873 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sssca1P56873 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sssca1P56873 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sssca1P56873 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sssca1P56873 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sssca1P56873 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sssca1P56873 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sssca1P56873 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sssca1P56873 Gm10655-201ENSMUST00000098658 1397 ntBASIC14.25□□□□□ -0.13
Sssca1P56873 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sssca1P56873 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Sssca1P56873 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Sssca1P56873 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Sssca1P56873 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sssca1P56873 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Sssca1P56873 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sssca1P56873 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
Sssca1P56873 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sssca1P56873 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sssca1P56873 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sssca1P56873 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sssca1P56873 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sssca1P56873 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Sssca1P56873 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sssca1P56873 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sssca1P56873 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.24□□□□□ -0.13
Sssca1P56873 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sssca1P56873 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.24□□□□□ -0.13
Sssca1P56873 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Sssca1P56873 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sssca1P56873 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sssca1P56873 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms