Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.98■□□□□ 0.63
Nub1P54729 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Nub1P54729 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nub1P54729 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Nub1P54729 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nub1P54729 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.97■□□□□ 0.63
Nub1P54729 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nub1P54729 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nub1P54729 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nub1P54729 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.97■□□□□ 0.63
Nub1P54729 Gm13168-201ENSMUST00000121771 632 ntBASIC18.97■□□□□ 0.63
Nub1P54729 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.97■□□□□ 0.63
Nub1P54729 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.97■□□□□ 0.63
Nub1P54729 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.97■□□□□ 0.63
Nub1P54729 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Nub1P54729 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nub1P54729 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nub1P54729 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nub1P54729 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Nub1P54729 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Nub1P54729 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nub1P54729 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.96■□□□□ 0.63
Nub1P54729 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nub1P54729 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nub1P54729 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Nub1P54729 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.96■□□□□ 0.63
Nub1P54729 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nub1P54729 Mir6349-201ENSMUST00000184059 97 ntBASIC18.96■□□□□ 0.63
Nub1P54729 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nub1P54729 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nub1P54729 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nub1P54729 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nub1P54729 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nub1P54729 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nub1P54729 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nub1P54729 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nub1P54729 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nub1P54729 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nub1P54729 Idnk-204ENSMUST00000226010 1898 ntBASIC18.95■□□□□ 0.62
Nub1P54729 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nub1P54729 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nub1P54729 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.95■□□□□ 0.62
Nub1P54729 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.95■□□□□ 0.62
Nub1P54729 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.95■□□□□ 0.62
Nub1P54729 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.95■□□□□ 0.62
Nub1P54729 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.95■□□□□ 0.62
Nub1P54729 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nub1P54729 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nub1P54729 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nub1P54729 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nub1P54729 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nub1P54729 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nub1P54729 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nub1P54729 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nub1P54729 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nub1P54729 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nub1P54729 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nub1P54729 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nub1P54729 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nub1P54729 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Nub1P54729 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nub1P54729 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nub1P54729 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Nub1P54729 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nub1P54729 Gm10698-201ENSMUST00000182663 604 ntBASIC18.94■□□□□ 0.62
Nub1P54729 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.94■□□□□ 0.62
Nub1P54729 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.94■□□□□ 0.62
Nub1P54729 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nub1P54729 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nub1P54729 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
Nub1P54729 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.94■□□□□ 0.62
Nub1P54729 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nub1P54729 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nub1P54729 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nub1P54729 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.93■□□□□ 0.62
Nub1P54729 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nub1P54729 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nub1P54729 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nub1P54729 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nub1P54729 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.93■□□□□ 0.62
Nub1P54729 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nub1P54729 Rarb-207ENSMUST00000225921 2756 ntBASIC18.93■□□□□ 0.62
Nub1P54729 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Nub1P54729 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nub1P54729 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nub1P54729 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nub1P54729 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nub1P54729 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nub1P54729 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nub1P54729 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Nub1P54729 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nub1P54729 Gm8520-201ENSMUST00000186517 868 ntBASIC18.92■□□□□ 0.62
Nub1P54729 Gm42545-201ENSMUST00000202755 922 ntBASIC18.92■□□□□ 0.62
Nub1P54729 Gm18025-201ENSMUST00000221733 862 ntBASIC18.92■□□□□ 0.62
Nub1P54729 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nub1P54729 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nub1P54729 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nub1P54729 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nub1P54729 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.92■□□□□ 0.62
Nub1P54729 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms