Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Msh6P54276 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Msh6P54276 Gm10418-201ENSMUST00000100943 576 ntBASIC22.47■■□□□ 1.19
Msh6P54276 Gm25016-201ENSMUST00000158399 131 ntBASIC22.47■■□□□ 1.19
Msh6P54276 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC22.47■■□□□ 1.19
Msh6P54276 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Msh6P54276 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Msh6P54276 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Msh6P54276 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Msh6P54276 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Msh6P54276 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Msh6P54276 Idnk-204ENSMUST00000226010 1898 ntBASIC22.47■■□□□ 1.19
Msh6P54276 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Msh6P54276 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Msh6P54276 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Msh6P54276 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Msh6P54276 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC22.47■■□□□ 1.19
Msh6P54276 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Msh6P54276 Gm7284-201ENSMUST00000131667 944 ntBASIC22.46■■□□□ 1.19
Msh6P54276 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Msh6P54276 Gm17971-201ENSMUST00000190239 806 ntBASIC22.46■■□□□ 1.19
Msh6P54276 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Msh6P54276 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Msh6P54276 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Msh6P54276 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Msh6P54276 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Msh6P54276 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Msh6P54276 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
Msh6P54276 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Msh6P54276 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Msh6P54276 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC22.45■■□□□ 1.18
Msh6P54276 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Msh6P54276 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Msh6P54276 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Msh6P54276 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC22.45■■□□□ 1.18
Msh6P54276 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Msh6P54276 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Msh6P54276 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Msh6P54276 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Msh6P54276 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Msh6P54276 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Msh6P54276 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Msh6P54276 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Msh6P54276 Gm9694-201ENSMUST00000193347 1189 ntBASIC22.44■■□□□ 1.18
Msh6P54276 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC22.44■■□□□ 1.18
Msh6P54276 Gm8258-201ENSMUST00000055593 1449 ntBASIC22.43■■□□□ 1.18
Msh6P54276 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Msh6P54276 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Msh6P54276 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Msh6P54276 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Msh6P54276 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Msh6P54276 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Msh6P54276 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Msh6P54276 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC22.43■■□□□ 1.18
Msh6P54276 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Msh6P54276 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Msh6P54276 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Msh6P54276 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC22.43■■□□□ 1.18
Msh6P54276 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Msh6P54276 Gm5112-201ENSMUST00000204407 2368 ntBASIC22.43■■□□□ 1.18
Msh6P54276 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Msh6P54276 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Msh6P54276 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Msh6P54276 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC22.42■■□□□ 1.18
Msh6P54276 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Msh6P54276 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
Msh6P54276 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Msh6P54276 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Msh6P54276 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Msh6P54276 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Msh6P54276 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Msh6P54276 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Msh6P54276 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Msh6P54276 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Msh6P54276 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC22.41■■□□□ 1.18
Msh6P54276 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Msh6P54276 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Msh6P54276 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC22.41■■□□□ 1.18
Msh6P54276 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Msh6P54276 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Msh6P54276 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Msh6P54276 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Msh6P54276 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Msh6P54276 AC124392.1-201ENSMUST00000225172 5324 ntBASIC22.4■■□□□ 1.18
Msh6P54276 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Msh6P54276 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC22.4■■□□□ 1.18
Msh6P54276 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Msh6P54276 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Msh6P54276 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Msh6P54276 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Msh6P54276 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Msh6P54276 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Msh6P54276 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.18
Msh6P54276 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Msh6P54276 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC22.39■■□□□ 1.18
Msh6P54276 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC22.39■■□□□ 1.18
Msh6P54276 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC22.39■■□□□ 1.18
Msh6P54276 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Msh6P54276 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC22.39■■□□□ 1.18
Msh6P54276 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms