Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdx1P52946 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Pdx1P52946 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdx1P52946 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pdx1P52946 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pdx1P52946 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pdx1P52946 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pdx1P52946 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pdx1P52946 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdx1P52946 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pdx1P52946 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdx1P52946 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pdx1P52946 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdx1P52946 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pdx1P52946 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.45■□□□□ 0.38
Pdx1P52946 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdx1P52946 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pdx1P52946 Gm8520-201ENSMUST00000186517 868 ntBASIC17.45■□□□□ 0.38
Pdx1P52946 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.45■□□□□ 0.38
Pdx1P52946 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.45■□□□□ 0.38
Pdx1P52946 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.45■□□□□ 0.38
Pdx1P52946 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pdx1P52946 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.45■□□□□ 0.38
Pdx1P52946 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdx1P52946 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Pdx1P52946 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pdx1P52946 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdx1P52946 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdx1P52946 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdx1P52946 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdx1P52946 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdx1P52946 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
Pdx1P52946 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdx1P52946 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdx1P52946 Gm37292-201ENSMUST00000192062 758 ntBASIC17.44■□□□□ 0.38
Pdx1P52946 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Pdx1P52946 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdx1P52946 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdx1P52946 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdx1P52946 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdx1P52946 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.44■□□□□ 0.38
Pdx1P52946 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdx1P52946 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.43■□□□□ 0.38
Pdx1P52946 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdx1P52946 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdx1P52946 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdx1P52946 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdx1P52946 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pdx1P52946 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdx1P52946 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdx1P52946 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.43■□□□□ 0.38
Pdx1P52946 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Pdx1P52946 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Pdx1P52946 Gm15378-201ENSMUST00000121894 207 ntBASIC17.43■□□□□ 0.38
Pdx1P52946 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pdx1P52946 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pdx1P52946 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.43■□□□□ 0.38
Pdx1P52946 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pdx1P52946 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdx1P52946 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdx1P52946 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdx1P52946 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdx1P52946 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdx1P52946 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdx1P52946 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdx1P52946 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdx1P52946 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pdx1P52946 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdx1P52946 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdx1P52946 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Pdx1P52946 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdx1P52946 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdx1P52946 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Pdx1P52946 Gm43183-201ENSMUST00000200632 547 ntBASIC17.42■□□□□ 0.38
Pdx1P52946 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.42■□□□□ 0.38
Pdx1P52946 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdx1P52946 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Pdx1P52946 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdx1P52946 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdx1P52946 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pdx1P52946 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.42■□□□□ 0.38
Pdx1P52946 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pdx1P52946 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdx1P52946 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pdx1P52946 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pdx1P52946 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
Pdx1P52946 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdx1P52946 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.41■□□□□ 0.38
Pdx1P52946 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.41■□□□□ 0.38
Pdx1P52946 Gm10418-201ENSMUST00000100943 576 ntBASIC17.41■□□□□ 0.38
Pdx1P52946 Gm11643-201ENSMUST00000119578 864 ntBASIC17.41■□□□□ 0.38
Pdx1P52946 Gm22240-201ENSMUST00000175225 82 ntBASIC17.41■□□□□ 0.38
Pdx1P52946 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdx1P52946 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pdx1P52946 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.41■□□□□ 0.38
Pdx1P52946 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.41■□□□□ 0.38
Pdx1P52946 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pdx1P52946 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Pdx1P52946 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdx1P52946 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms