Protein–RNA interactions for Protein: P51675

Ccr1, C-C chemokine receptor type 1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr1P51675 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ccr1P51675 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccr1P51675 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Ccr1P51675 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccr1P51675 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccr1P51675 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.21■□□□□ 0.67
Ccr1P51675 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.21■□□□□ 0.67
Ccr1P51675 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ccr1P51675 Gm18959-201ENSMUST00000208954 655 ntBASIC19.21■□□□□ 0.67
Ccr1P51675 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccr1P51675 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.21■□□□□ 0.67
Ccr1P51675 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccr1P51675 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccr1P51675 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccr1P51675 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccr1P51675 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.2■□□□□ 0.66
Ccr1P51675 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccr1P51675 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccr1P51675 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccr1P51675 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.2■□□□□ 0.66
Ccr1P51675 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ccr1P51675 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ccr1P51675 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.2■□□□□ 0.66
Ccr1P51675 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Ccr1P51675 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccr1P51675 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccr1P51675 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccr1P51675 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ccr1P51675 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccr1P51675 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccr1P51675 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Ccr1P51675 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Ccr1P51675 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.19■□□□□ 0.66
Ccr1P51675 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccr1P51675 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccr1P51675 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccr1P51675 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccr1P51675 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccr1P51675 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccr1P51675 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccr1P51675 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.19■□□□□ 0.66
Ccr1P51675 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccr1P51675 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccr1P51675 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccr1P51675 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccr1P51675 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccr1P51675 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccr1P51675 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccr1P51675 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.19■□□□□ 0.66
Ccr1P51675 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Ccr1P51675 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccr1P51675 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccr1P51675 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.19■□□□□ 0.66
Ccr1P51675 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccr1P51675 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccr1P51675 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccr1P51675 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccr1P51675 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.18■□□□□ 0.66
Ccr1P51675 Gm7638-201ENSMUST00000121348 967 ntBASIC19.18■□□□□ 0.66
Ccr1P51675 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.18■□□□□ 0.66
Ccr1P51675 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccr1P51675 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ccr1P51675 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccr1P51675 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ccr1P51675 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccr1P51675 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccr1P51675 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ccr1P51675 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccr1P51675 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ccr1P51675 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccr1P51675 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccr1P51675 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccr1P51675 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Ccr1P51675 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccr1P51675 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ccr1P51675 Gm2274-201ENSMUST00000184539 609 ntBASIC19.17■□□□□ 0.66
Ccr1P51675 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccr1P51675 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.17■□□□□ 0.66
Ccr1P51675 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccr1P51675 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ccr1P51675 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ccr1P51675 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccr1P51675 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ccr1P51675 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccr1P51675 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccr1P51675 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccr1P51675 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccr1P51675 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccr1P51675 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.16■□□□□ 0.66
Ccr1P51675 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.16■□□□□ 0.66
Ccr1P51675 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.16■□□□□ 0.66
Ccr1P51675 Gm45058-201ENSMUST00000205810 766 ntBASIC19.16■□□□□ 0.66
Ccr1P51675 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccr1P51675 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Ccr1P51675 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ccr1P51675 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccr1P51675 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Ccr1P51675 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccr1P51675 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccr1P51675 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms