Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Nkx2-1P50220 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-1P50220 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-1P50220 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-1P50220 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-1P50220 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-1P50220 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-1P50220 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-1P50220 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Nkx2-1P50220 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Nkx2-1P50220 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC14.65□□□□□ -0.06
Nkx2-1P50220 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Nkx2-1P50220 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-1P50220 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Nkx2-1P50220 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-1P50220 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.64□□□□□ -0.07
Nkx2-1P50220 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-1P50220 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-1P50220 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-1P50220 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-1P50220 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-1P50220 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-1P50220 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-1P50220 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-1P50220 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Nkx2-1P50220 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-1P50220 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-1P50220 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Nkx2-1P50220 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
Nkx2-1P50220 Cdc34b-202ENSMUST00000188741 1252 ntBASIC14.64□□□□□ -0.07
Nkx2-1P50220 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.64□□□□□ -0.07
Nkx2-1P50220 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-1P50220 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Nkx2-1P50220 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Nkx2-1P50220 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-1P50220 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.64□□□□□ -0.07
Nkx2-1P50220 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-1P50220 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Nkx2-1P50220 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-1P50220 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-1P50220 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-1P50220 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-1P50220 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-1P50220 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-1P50220 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Nkx2-1P50220 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-1P50220 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-1P50220 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-1P50220 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
Nkx2-1P50220 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC14.63□□□□□ -0.07
Nkx2-1P50220 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-1P50220 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-1P50220 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.63□□□□□ -0.07
Nkx2-1P50220 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-1P50220 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Nkx2-1P50220 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-1P50220 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-1P50220 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Nkx2-1P50220 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-1P50220 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC14.63□□□□□ -0.07
Nkx2-1P50220 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-1P50220 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-1P50220 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-1P50220 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.62□□□□□ -0.07
Nkx2-1P50220 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.62□□□□□ -0.07
Nkx2-1P50220 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-1P50220 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-1P50220 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-1P50220 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-1P50220 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-1P50220 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-1P50220 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.62□□□□□ -0.07
Nkx2-1P50220 Gm43060-201ENSMUST00000200621 289 ntBASIC14.62□□□□□ -0.07
Nkx2-1P50220 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC14.62□□□□□ -0.07
Nkx2-1P50220 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-1P50220 Gm40848-201ENSMUST00000221998 324 ntBASIC14.62□□□□□ -0.07
Nkx2-1P50220 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-1P50220 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-1P50220 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-1P50220 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-1P50220 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.62□□□□□ -0.07
Nkx2-1P50220 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-1P50220 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-1P50220 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-1P50220 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-1P50220 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-1P50220 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-1P50220 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-1P50220 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-1P50220 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-1P50220 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Nkx2-1P50220 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-1P50220 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-1P50220 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-1P50220 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC14.61□□□□□ -0.07
Nkx2-1P50220 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC14.61□□□□□ -0.07
Nkx2-1P50220 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-1P50220 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-1P50220 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.61□□□□□ -0.07
Nkx2-1P50220 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms