Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Brca1P48754 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Brca1P48754 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Brca1P48754 Gm37722-201ENSMUST00000193757 208 ntBASIC19.9■□□□□ 0.78
Brca1P48754 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Brca1P48754 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Brca1P48754 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Brca1P48754 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Brca1P48754 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Brca1P48754 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Brca1P48754 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC19.9■□□□□ 0.78
Brca1P48754 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.9■□□□□ 0.78
Brca1P48754 Mir8098-201ENSMUST00000184011 137 ntBASIC19.9■□□□□ 0.78
Brca1P48754 Gm27742-201ENSMUST00000184667 60 ntBASIC19.9■□□□□ 0.78
Brca1P48754 Gm5712-201ENSMUST00000199748 1043 ntBASIC19.9■□□□□ 0.78
Brca1P48754 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Brca1P48754 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Brca1P48754 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Brca1P48754 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Brca1P48754 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Brca1P48754 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Brca1P48754 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Brca1P48754 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Brca1P48754 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Brca1P48754 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.89■□□□□ 0.77
Brca1P48754 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Brca1P48754 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Brca1P48754 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Brca1P48754 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Brca1P48754 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Brca1P48754 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Brca1P48754 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Brca1P48754 Gm27459-201ENSMUST00000184860 107 ntBASIC19.88■□□□□ 0.77
Brca1P48754 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
Brca1P48754 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Brca1P48754 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Brca1P48754 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Brca1P48754 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Brca1P48754 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC19.88■□□□□ 0.77
Brca1P48754 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Brca1P48754 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Brca1P48754 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Brca1P48754 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Brca1P48754 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Brca1P48754 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Brca1P48754 Gm13884-201ENSMUST00000118103 829 ntBASIC19.87■□□□□ 0.77
Brca1P48754 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.87■□□□□ 0.77
Brca1P48754 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC19.87■□□□□ 0.77
Brca1P48754 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Brca1P48754 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Brca1P48754 Birc2-201ENSMUST00000054878 378 ntBASIC19.87■□□□□ 0.77
Brca1P48754 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Brca1P48754 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Brca1P48754 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Brca1P48754 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Brca1P48754 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.86■□□□□ 0.77
Brca1P48754 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Brca1P48754 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Brca1P48754 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.86■□□□□ 0.77
Brca1P48754 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Brca1P48754 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Brca1P48754 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Brca1P48754 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Brca1P48754 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Brca1P48754 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Brca1P48754 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Brca1P48754 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC19.86■□□□□ 0.77
Brca1P48754 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Brca1P48754 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Brca1P48754 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Brca1P48754 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
Brca1P48754 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Brca1P48754 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Brca1P48754 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Brca1P48754 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.85■□□□□ 0.77
Brca1P48754 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Brca1P48754 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Brca1P48754 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Brca1P48754 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Brca1P48754 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Brca1P48754 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Brca1P48754 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.85■□□□□ 0.77
Brca1P48754 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Brca1P48754 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Brca1P48754 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Brca1P48754 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.85■□□□□ 0.77
Brca1P48754 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Brca1P48754 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Brca1P48754 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Brca1P48754 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.84■□□□□ 0.77
Brca1P48754 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Brca1P48754 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.84■□□□□ 0.77
Brca1P48754 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.84■□□□□ 0.77
Brca1P48754 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Brca1P48754 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC19.84■□□□□ 0.77
Brca1P48754 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Brca1P48754 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Brca1P48754 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Brca1P48754 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.84■□□□□ 0.77
Brca1P48754 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms