Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TgfaP48030 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TgfaP48030 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TgfaP48030 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TgfaP48030 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TgfaP48030 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TgfaP48030 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TgfaP48030 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.32■□□□□ 0.04
TgfaP48030 Gm7153-201ENSMUST00000117092 455 ntBASIC15.32■□□□□ 0.04
TgfaP48030 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TgfaP48030 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.32■□□□□ 0.04
TgfaP48030 Gm17808-201ENSMUST00000200859 894 ntBASIC15.32■□□□□ 0.04
TgfaP48030 Gm18669-201ENSMUST00000216049 778 ntBASIC15.32■□□□□ 0.04
TgfaP48030 Gm7370-201ENSMUST00000219471 767 ntBASIC15.32■□□□□ 0.04
TgfaP48030 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TgfaP48030 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TgfaP48030 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TgfaP48030 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TgfaP48030 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TgfaP48030 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TgfaP48030 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TgfaP48030 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TgfaP48030 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TgfaP48030 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TgfaP48030 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TgfaP48030 Iqck-206ENSMUST00000208658 2891 ntBASIC15.32■□□□□ 0.04
TgfaP48030 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TgfaP48030 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TgfaP48030 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TgfaP48030 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TgfaP48030 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TgfaP48030 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TgfaP48030 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TgfaP48030 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TgfaP48030 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.31■□□□□ 0.04
TgfaP48030 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TgfaP48030 Gm7213-201ENSMUST00000215977 950 ntBASIC15.31■□□□□ 0.04
TgfaP48030 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TgfaP48030 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
TgfaP48030 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TgfaP48030 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.31■□□□□ 0.04
TgfaP48030 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TgfaP48030 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TgfaP48030 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TgfaP48030 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TgfaP48030 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TgfaP48030 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TgfaP48030 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TgfaP48030 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TgfaP48030 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TgfaP48030 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TgfaP48030 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TgfaP48030 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TgfaP48030 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TgfaP48030 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.3■□□□□ 0.04
TgfaP48030 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TgfaP48030 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TgfaP48030 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TgfaP48030 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TgfaP48030 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TgfaP48030 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.29■□□□□ 0.04
TgfaP48030 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TgfaP48030 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TgfaP48030 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
TgfaP48030 Gm11355-201ENSMUST00000121120 306 ntBASIC15.29■□□□□ 0.04
TgfaP48030 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.29■□□□□ 0.04
TgfaP48030 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TgfaP48030 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TgfaP48030 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TgfaP48030 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.29■□□□□ 0.04
TgfaP48030 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.29■□□□□ 0.04
TgfaP48030 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
TgfaP48030 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TgfaP48030 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TgfaP48030 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TgfaP48030 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TgfaP48030 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
TgfaP48030 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TgfaP48030 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TgfaP48030 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.28■□□□□ 0.04
TgfaP48030 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.28■□□□□ 0.04
TgfaP48030 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TgfaP48030 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TgfaP48030 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TgfaP48030 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TgfaP48030 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TgfaP48030 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TgfaP48030 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TgfaP48030 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TgfaP48030 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
TgfaP48030 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TgfaP48030 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TgfaP48030 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.27■□□□□ 0.04
TgfaP48030 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TgfaP48030 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.27■□□□□ 0.04
TgfaP48030 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TgfaP48030 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
TgfaP48030 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TgfaP48030 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.27■□□□□ 0.03
TgfaP48030 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms