Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-6P43688 Gm27463-201ENSMUST00000183569 57 ntBASIC16.68■□□□□ 0.26
Nkx2-6P43688 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-6P43688 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-6P43688 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-6P43688 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-6P43688 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-6P43688 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-6P43688 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-6P43688 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-6P43688 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-6P43688 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-6P43688 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.67■□□□□ 0.26
Nkx2-6P43688 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-6P43688 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-6P43688 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-6P43688 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-6P43688 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-6P43688 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-6P43688 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Nkx2-6P43688 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Nkx2-6P43688 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.67■□□□□ 0.26
Nkx2-6P43688 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.67■□□□□ 0.26
Nkx2-6P43688 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-6P43688 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-6P43688 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Nkx2-6P43688 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.67■□□□□ 0.26
Nkx2-6P43688 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-6P43688 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-6P43688 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-6P43688 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Nkx2-6P43688 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-6P43688 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-6P43688 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-6P43688 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-6P43688 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-6P43688 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Nkx2-6P43688 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-6P43688 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-6P43688 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Nkx2-6P43688 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-6P43688 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Nkx2-6P43688 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-6P43688 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-6P43688 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-6P43688 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.66■□□□□ 0.26
Nkx2-6P43688 Gm10517-202ENSMUST00000192970 758 ntBASIC16.66■□□□□ 0.26
Nkx2-6P43688 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.66■□□□□ 0.26
Nkx2-6P43688 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.66■□□□□ 0.26
Nkx2-6P43688 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.66■□□□□ 0.26
Nkx2-6P43688 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-6P43688 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-6P43688 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-6P43688 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.66■□□□□ 0.26
Nkx2-6P43688 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-6P43688 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Nkx2-6P43688 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-6P43688 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-6P43688 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-6P43688 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Nkx2-6P43688 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-6P43688 Gm10418-201ENSMUST00000100943 576 ntBASIC16.65■□□□□ 0.26
Nkx2-6P43688 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-6P43688 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.65■□□□□ 0.26
Nkx2-6P43688 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.65■□□□□ 0.26
Nkx2-6P43688 Gm38027-201ENSMUST00000192315 235 ntBASIC16.65■□□□□ 0.26
Nkx2-6P43688 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-6P43688 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.65■□□□□ 0.26
Nkx2-6P43688 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-6P43688 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-6P43688 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-6P43688 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-6P43688 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-6P43688 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Nkx2-6P43688 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-6P43688 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-6P43688 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-6P43688 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Nkx2-6P43688 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-6P43688 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-6P43688 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-6P43688 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-6P43688 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.64■□□□□ 0.25
Nkx2-6P43688 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-6P43688 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.64■□□□□ 0.25
Nkx2-6P43688 Gm6659-201ENSMUST00000174752 547 ntBASIC16.64■□□□□ 0.25
Nkx2-6P43688 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-6P43688 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.64■□□□□ 0.25
Nkx2-6P43688 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-6P43688 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-6P43688 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.64■□□□□ 0.25
Nkx2-6P43688 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-6P43688 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-6P43688 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx2-6P43688 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-6P43688 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-6P43688 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-6P43688 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-6P43688 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx2-6P43688 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms