Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sox18P43680 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox18P43680 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox18P43680 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox18P43680 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sox18P43680 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox18P43680 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.86■□□□□ 0.29
Sox18P43680 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Sox18P43680 Gm24589-201ENSMUST00000116692 94 ntBASIC16.86■□□□□ 0.29
Sox18P43680 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.86■□□□□ 0.29
Sox18P43680 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Sox18P43680 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox18P43680 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Sox18P43680 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox18P43680 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sox18P43680 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sox18P43680 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Sox18P43680 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Sox18P43680 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Sox18P43680 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sox18P43680 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Sox18P43680 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
Sox18P43680 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox18P43680 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Sox18P43680 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sox18P43680 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox18P43680 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Sox18P43680 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox18P43680 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sox18P43680 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.85■□□□□ 0.29
Sox18P43680 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.85■□□□□ 0.29
Sox18P43680 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Sox18P43680 Mir2861-201ENSMUST00000175539 82 ntBASIC16.85■□□□□ 0.29
Sox18P43680 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox18P43680 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox18P43680 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox18P43680 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox18P43680 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Sox18P43680 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox18P43680 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox18P43680 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sox18P43680 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sox18P43680 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sox18P43680 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox18P43680 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox18P43680 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox18P43680 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox18P43680 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
Sox18P43680 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sox18P43680 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox18P43680 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sox18P43680 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox18P43680 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Sox18P43680 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox18P43680 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Sox18P43680 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sox18P43680 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC16.84■□□□□ 0.29
Sox18P43680 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Sox18P43680 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox18P43680 Mir3081-201ENSMUST00000175305 84 ntBASIC16.84■□□□□ 0.29
Sox18P43680 Gm27357-201ENSMUST00000183754 135 ntBASIC16.84■□□□□ 0.29
Sox18P43680 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.84■□□□□ 0.29
Sox18P43680 Gm18115-201ENSMUST00000221209 621 ntBASIC16.84■□□□□ 0.29
Sox18P43680 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox18P43680 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox18P43680 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox18P43680 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox18P43680 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.84■□□□□ 0.29
Sox18P43680 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox18P43680 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Sox18P43680 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox18P43680 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sox18P43680 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sox18P43680 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sox18P43680 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sox18P43680 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sox18P43680 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox18P43680 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sox18P43680 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Sox18P43680 BC021767-201ENSMUST00000126387 1716 ntBASIC16.83■□□□□ 0.28
Sox18P43680 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sox18P43680 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.83■□□□□ 0.28
Sox18P43680 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox18P43680 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox18P43680 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox18P43680 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox18P43680 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox18P43680 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.83■□□□□ 0.28
Sox18P43680 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox18P43680 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.82■□□□□ 0.28
Sox18P43680 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox18P43680 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sox18P43680 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Sox18P43680 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Sox18P43680 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox18P43680 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox18P43680 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox18P43680 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Sox18P43680 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox18P43680 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms