Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sdc2P43407 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sdc2P43407 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Sdc2P43407 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sdc2P43407 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sdc2P43407 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sdc2P43407 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sdc2P43407 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sdc2P43407 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sdc2P43407 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sdc2P43407 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sdc2P43407 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.8■□□□□ 0.76
Sdc2P43407 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sdc2P43407 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.8■□□□□ 0.76
Sdc2P43407 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sdc2P43407 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.8■□□□□ 0.76
Sdc2P43407 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Sdc2P43407 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sdc2P43407 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sdc2P43407 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Sdc2P43407 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sdc2P43407 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sdc2P43407 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sdc2P43407 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sdc2P43407 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sdc2P43407 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sdc2P43407 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.79■□□□□ 0.76
Sdc2P43407 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sdc2P43407 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sdc2P43407 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Sdc2P43407 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sdc2P43407 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.79■□□□□ 0.76
Sdc2P43407 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.79■□□□□ 0.76
Sdc2P43407 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sdc2P43407 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Sdc2P43407 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sdc2P43407 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sdc2P43407 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Sdc2P43407 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sdc2P43407 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.79■□□□□ 0.76
Sdc2P43407 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sdc2P43407 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sdc2P43407 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sdc2P43407 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sdc2P43407 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sdc2P43407 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
Sdc2P43407 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.78■□□□□ 0.76
Sdc2P43407 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sdc2P43407 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sdc2P43407 Gm44549-201ENSMUST00000208351 577 ntBASIC19.78■□□□□ 0.76
Sdc2P43407 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.78■□□□□ 0.76
Sdc2P43407 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sdc2P43407 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sdc2P43407 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sdc2P43407 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sdc2P43407 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sdc2P43407 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Sdc2P43407 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sdc2P43407 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sdc2P43407 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.77■□□□□ 0.76
Sdc2P43407 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sdc2P43407 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.77■□□□□ 0.76
Sdc2P43407 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sdc2P43407 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sdc2P43407 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sdc2P43407 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Sdc2P43407 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Sdc2P43407 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sdc2P43407 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sdc2P43407 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Sdc2P43407 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sdc2P43407 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Sdc2P43407 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sdc2P43407 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sdc2P43407 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sdc2P43407 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Sdc2P43407 Gm13148-201ENSMUST00000118892 745 ntBASIC19.76■□□□□ 0.75
Sdc2P43407 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Sdc2P43407 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sdc2P43407 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sdc2P43407 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Sdc2P43407 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sdc2P43407 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.76■□□□□ 0.75
Sdc2P43407 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sdc2P43407 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sdc2P43407 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.76■□□□□ 0.75
Sdc2P43407 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sdc2P43407 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sdc2P43407 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sdc2P43407 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sdc2P43407 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Sdc2P43407 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sdc2P43407 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.75■□□□□ 0.75
Sdc2P43407 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Sdc2P43407 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sdc2P43407 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sdc2P43407 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sdc2P43407 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sdc2P43407 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sdc2P43407 Zfp783-201ENSMUST00000095946 670 ntBASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms